B.D.C. van Schaik publications

2020

• Zafarmand Mohammad Hadi, Spanjer Marit, Nicolaou Mary, Wijnhoven Hanneke A. H., van Schaik Barbera D. C., Uitterlinden Andre G., Snieder Harold, Vrijkotte Tanja G. M. Influence of Dietary Approaches to Stop Hypertension-Type Diet, Known Genetic Variants and Their Interplay on Blood Pressure in Early Childhood: ABCD Study Hypertension 2020;75 (1):59-70 [PubMed]
• Vogelezang Suzanne, Bradfield Jonathan P., Ahluwalia Tarunveer S., Curtin John A., Lakka Timo A., Grarup Niels, Scholz Markus, van der Most Peter J., Monnereau Claire, Stergiakouli Evie, Heiskala Anni, Horikoshi Momoko, Fedko Iryna O., Vilor-Tejedor Natalia, Cousminer Diana L., Standl Marie, Wang Carol A., Viikari Jorma, Geller Frank, Íñiguez Carmen, Pitkänen Niina, Chesi Alessandra, Bacelis Jonas, Yengo Loic, Torrent Maties, Ntalla Ioanna, Helgeland Øyvind, Selzam Saskia, Vonk Judith M., Zafarmand Mohammed H., Heude Barbara, Farooqi Ismaa Sadaf, Alyass Akram, Beaumont Robin N., Have Christian T., Rzehak Peter, Bilbao Jose Ramon, Schnurr Theresia M., Barroso Inês, Bønnelykke Klaus, Beilin Lawrence J., Carstensen Lisbeth, Charles Marie-Aline, Chawes Bo, Clément Karine, Closa-Monasterolo Ricardo, Custovic Adnan, Eriksson Johan G., van Schaik Barbera D. C., Vrijkotte Tanja G. M. Novel loci for childhood body mass index and shared heritability with adult cardiometabolic traits PLoS genetics 2020;16 (10) [PubMed]
• Vroman Heleen, Balzaretti Giulia, Belderbos Robert A., Klarenbeek Paul L., van Nimwegen Menno, Bezemer Koen, Cornelissen Robin, Niewold Ilse T. G., van Schaik Barbera D., van Kampen Antione H., Aerts Joachim G. J. V., de Vries Niek, Hendriks Rudi W. T cell receptor repertoire characteristics both before and following immunotherapy correlate with clinical response in mesothelioma Journal for immunotherapy of cancer 2020;8 (1) [PubMed]

2019

• Bradfield Jonathan P., Vogelezang Suzanne, Felix Janine F., Chesi Alessandra, Helgeland Øyvind, Horikoshi Momoko, Karhunen Ville, Lowry Estelle, Cousminer Diana L., Ahluwalia Tarunveer S., Thiering Elisabeth, Boh Eileen Tai-Hui, Zafarmand Mohammad H., Vilor-Tejedor Natalia, Wang Carol A., Joro Raimo, Chen Zhanghua, Gauderman William J., Pitkänen Niina, Parra Esteban J., Fernandez-Rhodes Lindsay, Alyass Akram, Monnereau Claire, Curtin John A., Have Christian T., McCormack Shana E., Hollensted Mette, Frithioff-Bøjsøe Christine, Valladares-Salgado Adan, Peralta-Romero Jesus, Teo Yik-Ying, Standl Marie, Leinonen Jaakko T., Holm Jens-Christian, Peters Triinu, Vioque Jesus, Vrijheid Martine, Simpson Angela, Custovic Adnan, Vaudel Marc, Canouil Mickaël, Lindi Virpi, Atalay Mustafa, Kähönen Mika, Raitakari Olli T., van Schaik Barbera D. C., Berkowitz Robert I., Cole Shelley A., Voruganti V. Saroja, Vrijkotte Tanja G. M., Hyppönen Elina, Timpson Nicholas J., Hakonarson Hakon, Jaddoe Vincent V. W., Struan F. A. A trans-ancestral meta-analysis of genome-wide association studies reveals loci associated with childhood obesity Human molecular genetics 2019;28 (19):3327-3338 [PubMed]
• Warrington Nicole M., Beaumont Robin N., Horikoshi Momoko, Day Felix R., Helgeland Øyvind, Laurin Charles, Bacelis Jonas, Peng Shouneng, Hao Ke, Feenstra Bjarke, Wood Andrew R., Mahajan Anubha, Tyrrell Jessica, Robertson Neil R., Rayner N. William, Qiao Zhen, Moen Gunn-Helen, Vaudel Marc, Marsit Carmen J., Chen Jia, Nodzenski Michael, Schnurr Theresia M., Zafarmand Mohammad H., Bradfield Jonathan P., Grarup Niels, Kooijman Marjolein N., Li-Gao Ruifang, Geller Frank, Ahluwalia Tarunveer S., Paternoster Lavinia, Rueedi Rico, Huikari Ville, Hottenga Jouke-Jan, Lyytikäinen Leo-Pekka, Cavadino Alana, Metrustry Sarah, Cousminer Diana L., Wu Ying, Thiering Elisabeth, Wang Carol A., Have Christian T., Vilor-Tejedor Natalia, Joshi Peter K., Painter Jodie N., Ntalla Ioanna, van Leeuwen Elisabeth M., van Kampen Antoine H. C., van Schaik Barbera D. C., Rosendaal Frits R., Vrijkotte Tanja G. M., Perry John R. B., Evans David M., Freathy Rachel M. Maternal and fetal genetic effects on birth weight and their relevance to cardio-metabolic risk factors Nature genetics 2019;51 (5):804-814 [PubMed]
• Vergroesen Rochelle D., Slot Linda M., van Schaik Barbera D. C., Koning Marvyn T., Rispens Theo, van Kampen Antoine H. C., Toes René E. M., Scherer Hans U. N-Glycosylation Site Analysis of Citrullinated Antigen-Specific B-Cell Receptors Indicates Alternative Selection Pathways During Autoreactive B-Cell Development Frontiers in immunology 2019;10:2092 [PubMed]
• Pollastro Sabrina, Klarenbeek Paul L., Doorenspleet Marieke E., van Schaik Barbera D. C., Esveldt Rebecca E. E., Thurlings Rogier M., Boumans Maria J. H., Gerlag Danielle M., Tak Paul P., Vos Koen, Baas Frank, van Kampen Antoine H. C., de Vries Niek Non-response to rituximab therapy in rheumatoid arthritis is associated with incomplete disruption of the B cell receptor repertoire Annals of the rheumatic diseases 2019;78 (10):1339-1345 [PubMed]
• Shvetsova Ekaterina, Sofronova Alina, Monajemi Ramin, Gagalova Kristina, Draisma Harmen H. M., White Stefan J., Santen Gijs W. E., Chuva de Sousa Lopes Susana M., Heijmans Bastiaan T., van Meurs Joyce, Jansen Rick, Franke Lude, Kiełbasa Szymon M., den Dunnen Johan T., ‘t Hoen Peter A. C., Heijmans Bastiaan T., ’t Hoen Peter Ac, van Meurs Joyce, Boomsma Dorret I., Pool René, van Dongen Jenny, Hottenga Jouke J., van Greevenbroek Marleen Mj, Stehouwer Coen Da, van der Kallen Carla Jh, Schalkwijk Casper G., Wijmenga Cisca, Zhernakova Sasha, Tigchelaar Ettje F., Slagboom P. Eline, Beekman Marian, Deelen Joris, van Heemst Diana, Veldink Jan H., van den Berg Leonard H., van Duijn Cornelia M., Hofman Bert A., Uitterlinden André G., Jhamai P. Mila, Verbiest Michael, Suchiman H. Eka D., Verkerk Marijn, van der Breggen Ruud, van Rooij Jeroen, Lakenberg Nico, Mei Hailiang, Bot Jan, van Schaik Bd, van Leeuwen E. M., van Schaik B. D., Swertz Morris, Wijmenga Cisca Skewed X-inactivation is common in the general female population European journal of human genetics 2019;27 (3):455-465 [PubMed]
• Nersisyan Lilit, Nikoghosyan Maria, Arakelyan Arsen, Francioli Laurent C., Menelaou Androniki, Pulit Sara L., Elbers Clara C., Kloosterman Wigard P., van Setten Jessica, Nijman Isaäc J., Renkens Ivo, de Bakker Paul I. W., van Dijk Freerk, Neerincx Pieter B. T., Deelen Patrick, Kanterakis Alexandros, Dijkstra Martijn, Byelas Heorhiy, van der Velde K. Joeri, Platteel Mathieu, Swertz Morris A., Wijmenga Cisca, Palamara Pier Francesco, Pe’er Itsik, Ye Kai, Lameijer Eric-Wubbo, Moed Matthijs H., Beekman Marian, de Craen Anton J. M., Suchiman H. Eka D., Slagboom P. Eline, Guryev Victor, Abdellaoui Abdel, Jan Hottenga Jouke, Kattenberg Mathijs, Willemsen Gonneke, Boomsma Dorret I., van Leeuwen Elisabeth M., Karssen Lennart C., Amin Najaf, Rivadeneira Fernando, Isaacs Aaron, Hofman Albert, Uitterlinden André G., van Duijn Cornelia M., van Oven Mannis, van Schaik Barbera D. C., van Leeuwen Elisabeth M., van Schaik Barbera D. C. WGS-based telomere length analysis in Dutch family trios implicates stronger maternal inheritance and a role for RRM1 gene Scientific reports 2019;9 (1) [PubMed]

2018

• Musters Anne, Klarenbeek Paul L., Doorenspleet Marieke E., Balzaretti Giulia, Esveldt Rebecca E. E., van Schaik Barbera D. C., Jongejan Aldo, Tas Sander W., van Kampen Antoine H. C., Baas Frank, de Vries Niek In rheumatoid arthritis, synovitis at different inflammatory sites is dominated by shared but patient-specific T cell clones Journal of immunology (Baltimore, Md. 2018;201 (2):417-422 [PubMed]

2017

• Reshetova Polina, van Schaik Barbera D. C., Klarenbeek Paul L., Doorenspleet Marieke E., Esveldt Rebecca E. E., Tak Paul-Peter, Guikema Jeroen E. J., de Vries Niek, van Kampen Antoine H. C. Computational Model Reveals Limited Correlation between Germinal Center B-Cell Subclone Abundancy and Affinity: Implications for Repertoire Sequencing Frontiers in immunology 2017;8:221 [PubMed]

2016

• Hehir-Kwa Jayne Y., Marschall Tobias, Kloosterman Wigard P., Francioli Laurent C., Baaijens Jasmijn A., Dijkstra Louis J., Abdellaoui Abdel, Koval Vyacheslav, Thung Djie Tjwan, Wardenaar René, Renkens Ivo, Coe Bradley P., Deelen Patrick, De Ligt Joep, Lameijer Eric Wubbo, Van Dijk Freerk, Hormozdiari Fereydoun, Uitterlinden André G., Van Duijn Cornelia M., Eichler Evan E., De Bakker Paul I.W., Swertz Morris A., Wijmenga Cisca, Van Ommen Gert Jan B., Slagboom P. Eline, Boomsma Dorret I., Schönhuth Alexander, Ye Kai, Guryev Victor, Bovenberg Jasper A., De Craen Anton J.M., Beekman Marian, Hofman Albert, Willemsen Gonneke, Wolffenbuttel Bruce, Platteel Mathieu, Du Yuanping, Chen Ruoyan, Cao Hongzhi, Cao Rui, Sun Yushen, Cao Jeremy Sujie, Neerincx Pieter B.T., Dijkstra Martijn, Byelas George, Kanterakis Alexandros, Bot Jan, Vermaat Martijn, Laros Jeroen F.J., Den Dunnen Johan T., De Knijff Peter, Karssen Lennart C., Van Leeuwen Elisa M., Amin Najaf, Rivadeneira Fernando, Estrada Karol, Hottenga Jouke Jan, Kattenberg V. Mathijs, Van Enckevort David, Mei Hailiang, Santcroos Mark, Van Schaik Barbera D.C., Handsaker Robert E., McCarroll Steven A., Ko Arthur, Sudmant Peter, Nijman Isaac J. A high-quality human reference panel reveals the complexity and distribution of genomic structural variants Nature communications 2016;7 [PubMed]

2015

• Kloosterman Wigard P., Francioli Laurent C., Hormozdiari Fereydoun, Marschall Tobias, Hehir-Kwa Jayne Y., Abdellaoui Abdel, Lameijer Eric Wubbo, Moed Matthijs H., Koval Vyacheslav, Renkens Ivo, Van Roosmalen Markus J., Arp Pascal, Karssen Lennart C., Coe Bradley P., Handsaker Robert E., Suchiman Eka D., Cuppen Edwin, Thung Djie Tjwan, McVey Mitch, Wendl Michael C., Uitterlinden André, Van Duijn Cornelia M., Swertz Morris A., Wijmenga Cisca, Van Ommen Gert Jan B., Slagboom P. Eline, Boomsma Dorret I., Schönhuth Alexander, Eichler Evan E., De Bakker Paul I.W., Ye Kai, Guryev Victor, Van Ommen Gert Jan B., Bovenberg Jasper A., De Craen Anton J.M., Beekman Marian, Hofman Albert, Willemsen Gonneke, Wolffenbuttel Bruce, Platteel Mathieu, Du Yuanping, Chen Ruoyan, Cao Hongzhi, Cao Rui, Sun Yushen, Cao Jeremy Sujie, Van Dijk Freerk, Neerincx Pieter B.T., Deelen Patrick, Van Schaik Barbera D.C. Characteristics of de novo structural changes in the human genome Genome research 2015;25 (6):792-801 [PubMed]
• Remmerswaal Ester B. M., Klarenbeek Paul L., Alves Nuno L., Doorenspleet Marieke E., van Schaik Barbera D. C., Esveldt Rebecca E. E., Idu Mirza M., van Leeuwen Ester M. M., van der Bom-Baylon Nelly, van Kampen Antoine H. C., Koch Sven D., Pircher Hanspeter, Bemelman Frederike J., ten Brinke Anja, Baas Frank, ten Berge Ineke J. M., van Lier Rene A. W., de Vries Niek Clonal evolution of CD8+ T cell responses against latent viruses: relationship among phenotype, localization, and function Journal of virology 2015;89 (1):568-580 [PubMed]
• Klarenbeek Paul L., Doorenspleet Marieke E., Esveldt Rebecca E. E., van Schaik Barbera D. C., Lardy Neubury, van Kampen Antoine H. C., Tak Paul P., Plenge Robert M., Baas Frank, de Bakker Paul I. W., de Vries Niek Somatic Variation of T-Cell Receptor Genes Strongly Associate with HLA Class Restriction PLoS ONE 2015;10 (10):e0140815 [PubMed]
• Canuti Marta, van Beveren Nico J. M., Jazaeri Farsani Seyed Mohammad, de Vries Michel, Deijs Martin, Jebbink Maarten F., Zaaijer Hans L., van Schaik Barbera D. C., van Kampen Antoine H. C., van der Kuyl Antoinette C., de Haan Lieuwe, Storosum Jitschak G., van der Hoek Lia Viral metagenomics in drug-naïve, first-onset schizophrenia patients with prominent negative symptoms Psychiatry research 2015;229 (3):678-684 [PubMed]

2014

• van Schaik Barbera, Klarenbeek Paul, Doorenspleet Marieke, van Kampen Antoine, Moody D. Branch, de Vries Niek, van Rhijn Ildiko Discovery of invariant T cells by next-generation sequencing of the human TCR α-chain repertoire Journal of immunology (Baltimore, Md. 2014;193 (10):5338-5344 [PubMed]
• Deelen Patrick, Menelaou Androniki, van Leeuwen Elisabeth M., Kanterakis Alexandros, van Dijk Freerk, Medina-Gomez Carolina, Francioli Laurent C., Hottenga Jouke Jan, Karssen Lennart C., Estrada Karol, Kreiner-Møller Eskil, Rivadeneira Fernando, van Setten Jessica, Gutierrez-Achury Javier, Westra Harm-Jan, Franke Lude, van Enckevort David, Dijkstra Martijn, Byelas Heorhiy, van Duijn Cornelia M., de Bakker Paul I. W., Wijmenga Cisca, Swertz Morris A., Neerincx Pieter B. T., Pulit Sara L., Elbers Clara C., Palamara Pier Francesco, Pe'er Itsik, Abdellaoui Abdel, Kloosterman Wigard P., van Oven Mannis, Vermaat Martijn, Li Mingkun, Laros Jeroen F. J., Stoneking Mark, de Knijff Peter, Kayser Manfred, Veldink Jan H., van den Berg Leonard H., den Dunnen Johan T., Amin Najaf, van der Velde K. Joeri, Kattenberg Mathijs, van Schaik Barbera D. C., Bot Jan, Nijman Isaäuc J., Mei Hailiang, Koval Vyacheslav, Ye Kai, Lameijer Eric-Wubbo Improved imputation quality of low-frequency and rare variants in European samples using the 'Genome of The Netherlands' European journal of human genetics 2014;22 (11):1321-1326 [PubMed]
• Doorenspleet M. E., Klarenbeek P. L., de Hair M. J. H., van Schaik B. D. C., Esveldt R. E. E., van Kampen A. H. C., Gerlag D. M., Musters A. [=Anne], Baas F., Tak P. P., de Vries N. [=Niek] Rheumatoid arthritis synovial tissue harbours dominant B-cell and plasma-cell clones associated with autoreactivity Annals of the rheumatic diseases 2014;73 (4):756-762 [PubMed]
• Piet Jurgen R., Geldhoff Madelijn, van Schaik Barbera D. C., Brouwer Matthijs C., Valls Seron Mercedes, Jakobs Marja E., Schipper Kim, Pannekoek Yvonne, Zwinderman Aeilko H., van der Poll Tom, van Kampen Antoine H. C., Baas Frank, van der Ende Arie, van de Beek Diederik Streptococcus pneumoniae arginine synthesis genes promote growth and virulence in pneumococcal meningitis Journal of infectious diseases 2014;209 (11):1781-1791 [PubMed]
• Francioli Laurent C., Menelaou Androniki, Pulit Sara L., van Dijk Freerk, Palamara Pier Francesco, Elbers Clara C., Neerincx Pieter B. T., Ye Kai, Guryev Victor, Kloosterman Wigard P., Deelen Patrick, Abdellaoui Abdel, van Leeuwen Elisabeth M., van Oven Mannis, Vermaat Martijn, Li Mingkun, Laros Jeroen F. J., Karssen Lennart C., Kanterakis Alexandros, Amin Najaf, Hottenga Jouke Jan, Lameijer Eric-Wubbo, Kattenberg Mathijs, Dijkstra Martijn, Byelas Heorhiy, van Setten Jessica, van Schaik Barbera D. C., Bot Jan, Nijman Isaäc J., Renkens Ivo, Marschall Tobias, Schönhuth Alexander, Hehir-Kwa Jayne Y., Handsaker Robert E., Polak Paz, Sohail Mashaal, Vuzman Dana, Hormozdiari Fereydoun, van Enckevort David, Mei Hailiang, Koval Vyacheslav, Moed Matthijs H., van der Velde K. Joeri, Rivadeneira Fernando, Estrada Karol, Medina-Gomez Carolina, Isaacs Aaron, McCarroll Steven A., Beekman Marian, de Craen Anton J. M. Whole-genome sequence variation, population structure and demographic history of the Dutch population Nature genetics 2014;46 (8):818-825 [PubMed]

2013

• Santcroos M., van Schaik B. D. C., Shahand S., Olabarriaga S., Luckow A., Jha S. Exploring Dynamic Enactment of Scientific Workflows Using Pilot-Abstractionsin: Pavan Balaji, Dick Epema, Thomas Fahringer, editors. CCGrid 2013 : 13th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing : 13–16 May 2013 Delft Netherlands. 2013. p. 311-318, ISBN 9780768549965
• Wensveen Felix M., Klarenbeek Paul L., van Gisbergen Klaas P. J. M., Pascutti Maria F., Derks Ingrid A. M., van Schaik Barbera D. C., ten Brinke Anja, de Vries Niek, Cekinovic Durdica, Jonjic Stipan, van Lier René A. W., Eldering Eric Pro-apoptotic protein Noxa regulates memory T cell population size and protects against lethal immunopathology Journal of immunology (Baltimore, Md. 2013;190 (3):1180-1191 [PubMed]
• Olabarriaga Silvia D., Jaghoori Mohammad Mahdi, Korkhov Vladimir, van Schaik Barbera, van Kampen Antoine Understanding workflows for distributed computing: nitty-gritty detailsin: Johan Montagnat, Ian Taylor, editors. WORKS '13 : Proceedings of the 8th Workshop on Workflows in Support of Large-Scale Science. New York: ACM; 2013. p. 68-76, ISBN 9781450325028

2012

• van Schaik Barbera D. C., Santcroos Mark, Korkhov Vladimir, Jongejan Aldo, Willemsen Marcel, van Kampen Antoine H. C., Olabarriaga Silvia D. Challenges in DNA sequence analysis on a production gridin: A. Anonymous, editors. EGI Community Forum 2012 / EMI Second Technical Conference. S.l.: s.n.; 2012. p. 1-19
• Klarenbeek P. L., Remmerswaal E. B. M., ten Berge I. J. M., Doorenspleet M. E., van Schaik B. D. C., Esveldt R. E. E., Koch S. D., ten Brinke A., van Kampen A. H. C., Bemelman F. J., Tak P. P., Baas F., de Vries N. [=Niek], van Lier R. A. W. Deep sequencing of antiviral T-cell responses to HCMV and EBV in humans reveals a stable repertoire that is maintained for many years PLoS pathogens 2012;8 (9):e1002889 [PubMed]
• van Houdt Jeroen K. J., Nowakowska Beata Anna, Sousa Sérgio B., van Schaik Barbera D. C., Seuntjens Eve, Avonce Nelson, Sifrim Alejandro, Abdul-Rahman Omar A., van den Boogaard Marie-José H., Bottani Armand, Castori Marco, Cormier-Daire Valérie, Deardorff Matthew A., Filges Isabel, Fryer Alan, Fryns Jean-Pierre, Gana Simone, Garavelli Livia, Gillessen-Kaesbach Gabriele, Hall Bryan D., Horn Denise, Huylebroeck Danny, Klapecki Jakub, Krajewska-Walasek Malgorzata, Kuechler Alma, Lines Matthew A., Maas Saskia, Macdermot Kay D., McKee Shane, Magee Alex, de Man Stella A., Moreau Yves, Morice-Picard Fanny, Obersztyn Ewa, Pilch Jacek, Rosser Elizabeth, Shannon Nora, Stolte-Dijkstra Irene, van Dijck Patrick, Vilain Catheline, Vogels Annick, Wakeling Emma, Wieczorek Dagmar, Wilson Louise, Zuffardi Orsetta, van Kampen Antoine H. C., Devriendt Koenraad, Hennekam Raoul, Vermeesch Joris Robert Heterozygous missense mutations in SMARCA2 cause Nicolaides-Baraitser syndrome Nature genetics 2012;44 (4):445-U261 [PubMed]
• Klarenbeek P. L., de Hair M. J. H., Doorenspleet M. E., van Schaik B. D. C., Esveldt R. E. E., van de Sande M. G. H., Cantaert T., Gerlag D. M., Baeten D., van Kampen A. H. C., Baas F., Tak P. P., de Vries N. [=Niek] Inflamed target tissue provides a specific niche for highly expanded T-cell clones in early human autoimmune disease Annals of the rheumatic diseases 2012;71 (6):1088-1093 [PubMed]
• de Vries Michel, Oude Munnink Bas B., Deijs Martin, Canuti Marta, Koekkoek Sylvie M., Molenkamp Richard, Bakker Margreet, Jurriaans Suzanne, van Schaik Barbera D. C., Luyf Angela C., Olabarriaga Silvia D., van Kampen Antoine H. C., van der Hoek Lia Performance of VIDISCA-454 in Feces-Suspensions and Serum Viruses 2012;4 (8):1328-1334 [PubMed]
• Madougou Souley, Santcroos Mark, Benabdelkader Ammar, van Schaik Barbera D. C., Shahand Shayan, Korkhov Vladimir, van Kampen Antoine H. C., Olabarriaga Sílvia D. Provenance for distributed biomedical workflow execution Studies in health technology and informatics 2012;175:91-100 [PubMed]

2011

• de Vries Michel, Deijs Martin, Canuti Marta, van Schaik Barbera D. C., Faria Nuno R., van de Garde Martijn D. B., Jachimowski Loes C. M., Jebbink Maarten F., Jakobs Marja, Luyf Angela C. M., Coenjaerts Frank E. J., Claas Eric C. J., Molenkamp Richard, Koekkoek Sylvie M., Lammens Christine, Leus Frank, Goossens Herman, Ieven Margareta, Baas Frank, van der Hoek Lia A Sensitive Assay for Virus Discovery in Respiratory Clinical Samples PLoS ONE 2011;6 (1):e16118 [PubMed]
• Mohammed Y., Shahand S., Korkhov V., Luyf A. C. M., van Schaik B. D. C., Caan M. W. A., van Kampen A. H. C., Palmblad M., Olabarriaga S. D. Data Decomposition in Biomedical e-Science Applicationsin: Dieter Kranzlmüller, null et al, editors. eScienceW 2011 : The Seventh IEEE International Conference on e-Science Workshops : Stockholm, Sweden 5–8 December 2011. Los Alamitos: IEEE; 2011. p. 158-165, ISBN 9780769545981
• Piet J. R., Huis in 't Veld R. A. G., van Schaik B. D. C., van Kampen A. H. C., Baas F., van de Beek D., Pannekoek Y., van der Ende A. Genome sequence of Neisseria meningitidis serogroup B strain H44/76 Journal of bacteriology 2011;193 (9):2371-2372 [PubMed]
• Ritz Katja, van Schaik Barbera D. C., Jakobs Marja E., Aronica Eleonora, Tijssen Marina A., van Kampen Antoine H. C., Baas Frank Looking ultra deep: short identical sequences and transcriptional slippage Genomics 2011;98 (2):90-95 [PubMed]
• Ritz Katja, van Schaik Barbera Dc, Jakobs Marja E., van Kampen Antoine H., Aronica Eleonora, Tijssen Marina A., Baas Frank SGCE isoform characterization and expression in human brain: implications for myoclonus-dystonia pathogenesis? European journal of human genetics 2011;19 (4):438-444 [PubMed]

2010

• Klarenbeek Paul L., Tak Paul P., van Schaik Barbera D. C., Zwinderman Aeilko H., Jakobs Marja E., Zhang Zhuoli, van Kampen Antoine H. C., van Lier René A. W., Baas Frank, de Vries Niek Human T-cell memory consists mainly of unexpanded clones Immunology letters 2010;133 (1):42-48 [PubMed]
• Luyf Angela C. M., van Schaik Barbera D. C., de Vries Michel, Baas Frank, van Kampen Antoine H. C., Olabarriaga Silvia D. Initial steps towards a production platform for DNA sequence analysis on the grid BMC bioinformatics 2010;11 (1):598 [PubMed]

2009

• van Hooff Sander R., Koster Jan, Hulsen Tim, van Schaik Barbera D. C., Roos Marco, van Batenburg Marcel F., Versteeg Rogier, van Kampen Antoine H. C. The Construction of Genome-Based Transcriptional Units Omics 2009;13 (2):105-114 [PubMed]

2003

• van Kampen A. H. C., Ruijter J. M., van Schaik B. D. C., Caron H. N., Versteeg R. Gene expression informatics and analysisin: M. R. Barnes, I. C. Gray, editors. Bioinformatics for geneticists. Chichester: John Wiley & Sons; 2003. p. 319-344, ISBN 9780470843932
• Versteeg Rogier, van Schaik Barbera D. C., van Batenburg Marinus F., Roos Marco, Monajemi Ramin, Caron Huib, Bussemaker Harmen J., van Kampen Antoine H. C. The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes Genome research 2003;13 (9):1998-2004 [PubMed]

2002

• Godfried Marc B., Veenstra Monique, van Sluis Peter, Boon Kathy, van Asperen Ronald, Hermus Marie Christien, van Schaik Barbara D. C., Voûte Tom P. A., Schwab Manfred, Versteeg Rogier, Caron Huib N. The N-myc and c-myc downstream pathways include the chromosome 17q genes nm23-H1 and nm23-H2 Oncogene 2002;21 (13):2097-2101 [PubMed]

2001

• Caron H., van Schaik B., van der Mee M., Baas F., Riggins G., van Sluis P., Hermus M. C., van Asperen R., Boon K., Voûte P. A., Heisterkamp S., van Kampen Antoine, Versteeg R. The human transcriptome map: clustering of highly expressed genes in chromosomal domains Science 2001;291 (5507):1289-1292 [PubMed]
• Spieker N., van Sluis P., Beitsma M., Boon K., van Schaik B. D., van Kampen A. H., Caron H., Versteeg R. The MEIS1 oncogene is highly expressed in neuroblastoma and amplified in cell line IMR32 Genomics 2001;71 (2):214-221 [PubMed]

2000

• van Kampen A. H., van Schaik B. D., Pauws E., Michiels E. M., Ruijter J. M., Caron H. N., Versteeg R., Heisterkamp S. H., Leunissen J. A., Baas F., van der Mee M. USAGE: a web-based approach towards the analysis of SAGE data. Serial Analysis of Gene Expression Bioinformatics (Oxford, England) 2000;16 (10):899-905 [PubMed]