B.F. Coolen MEng PhD publications

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Publications MEng PhD B.F. Coolen

Position
Assistant Professor
Main activities
Education, Research
Specialisation
Magnetic Resonance Imaging (MRI), Cardiovascular diseases
Focus of research

I am an assistent professor at the 'Preclinical and Translational MRI' group within the department of  'Biomedical Engineering and Physics' at the Amsterdam UMC (location AMC). 
I am working on the development of various kinds of Magnetic Resonanance Imaging (MRI) methodologies with focus on cardiovascular diseases as well as broad application of MRI in preclinical animal models.

2020

  • Peper Eva S. Accelerated cardiovascular flow MRI 2020. 157p. ISBN 9789463326360. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Nederveen Aart J., Strijkers Gustav J.; Co-supervisors: van Ooij Pim, Coolen Bram F.)
  • Gottwald Lukas M. Accelerated Flow and Motion MRI 2020. 189p. ISBN 9789464162899. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Nederveen Aart J., Strijkers Gustav J.; Co-supervisors: van Ooij Pim, Coolen Bram F.)
  • Naessens Daphne M. P., Coolen Bram F., de Vos Judith, Vanbavel Ed, Strijkers Gustav J., Bakker Erik N. T. P. Altered brain fluid management in a rat model of arterial hypertension Fluids and barriers of the CNS 2020;17 (1) [PubMed]
  • Schoormans Jasper, Calcagno Claudia, Daal Mariah R. R., Wüst Rob C. I., Faries Christopher, Maier Alexander, Teunissen Abraham J. P., Naidu Sonum, Sanchez-Gaytan Brenda L., Nederveen Aart J., Fayad Zahi A., Mulder Willem J. M., Coolen Bram F., Strijkers Gustav J. An iterative sparse deconvolution method for simultaneous multicolor 19F-MRI of multiple contrast agents Magnetic resonance in medicine 2020;83 (1):228-239 [PubMed]
  • Schoormans Jasper, Strijkers Gustav J, Hansen Anders C, Nederveen Aart J, Coolen Bram F Compressed sensing MRI with variable density averaging (CS-VDA) outperforms full sampling at low SNR Physics in medicine and biology 2020;65 (4) [PubMed]
  • Peper Eva S., Gottwald Lukas M., Zhang Qinwei, Coolen Bram F., van Ooij Pim, Nederveen Aart J., Strijkers Gustav J. Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress Journal of cardiovascular magnetic resonance 2020;22 (1) [PubMed]
  • Gottwald L. M., Töger J., Markenroth Bloch K., Peper E. S., Coolen B. F., Strijkers G. J., van Ooij P., Nederveen A. J. High Spatiotemporal Resolution 4D Flow MRI of Intracranial Aneurysms at 7T in 10 Minutes AJNR. American journal of neuroradiology 2020;41 (7):1201-1208 [PubMed]
  • Jensen Bjarke, Coolen Bram F., Smit Theodoor H. Hymenophore configuration of the oak mazegill (Daedalea quercina) Mycologia 2020;112 (5):895-907 [PubMed]
  • Schoormans Jasper Innovations in sparse MRI: In search of a free lunch 2020. 143p. ISBN 9789463326612. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Strijkers Gustav J., Nederveen Aart J.; Co-supervisor: Coolen Bram F.)
  • Zhang Qinwei, van Houdt Petra J., Lambregts Doenja M. J., van Triest Baukelien, Kop Marnix P. M., Coolen Bram F., Strijkers Gustav J., van der Heide Uulke A., Nederveen Aart J. Locally advanced rectal cancer: 3D diffusion-prepared stimulated-echo turbo spin-echo versus 2D diffusion-weighted echo-planar imaging European Radiology Experimental 2020;4 (1) [PubMed]
  • Gottwald Lukas M., Peper Eva S., Zhang Qinwei, Coolen Bram F., Strijkers Gustav J., Nederveen Aart J., van Ooij Pim Pseudo-spiral sampling and compressed sensing reconstruction provides flexibility of temporal resolution in accelerated aortic 4D flow MRI: A comparison with k-t principal component analysis NMR in biomedicine 2020;33 (4) [PubMed]
  • Zheng Kang He H. Seeing is believing: Translational imaging approaches in cardiovascular disease 2020. 289p. ISBN 9789463759298. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Stroes Erik S. G., Nederveen Aart J.; Co-supervisors: Coolen Bram F., Verberne Hein J.)
  • Willemink Martin J., Coolen Bram F., Dyvorne Hadrien, Robson Philip M., Bander Ilda, Ishino Seigo, Pruzan Alison, Sridhar Arthi, Zhang Bei, Balchandani Priti, Mani Venkatesh, Strijkers Gustav J., Nederveen Aart J., Leiner Tim, Fayad Zahi A., Mulder Willem J.M., Calcagno Claudia Ultra-high resolution, 3-dimensional magnetic resonance imaging of the atherosclerotic vessel wall at clinical 7T PLoS ONE 2020;15 (12 December) [PubMed]

2019

  • Peper Eva S., Leopaldi Alberto M., van Tuijl Sjoerd, Coolen Bram F., Strijkers Gustav J., Baan Jan, Planken R. Nils, de Weger Arend, Nederveen Aart J., Marquering Henk A., van Ooij Pim An isolated beating pig heart platform for a comprehensive evaluation of intracardiac blood flow with 4D flow MRI: a feasibility study European Radiology Experimental 2019;3 (1) [PubMed]
  • Zhang Qinwei, Coolen Bram F, van den Berg Sandra, Kotek Gyula, Rivera Debra S, Klomp Dennis W J, Strijkers Gustav J, Nederveen Aart J Comparison of four MR carotid surface coils at 3T PLoS ONE 2019;14 (3) [PubMed]
  • Zhang Qinwei Distortion-free high-resolution diffusion MRI 2019. 141p. ISBN 9789463325509. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Nederveen A. J. , Strijkers G. J.; Co-supervisor: Coolen B. F.)
  • Wüst Rob C. I., Calcagno Claudia, Daal Mariah R. R., Nederveen Aart J., Coolen Bram F., Strijkers Gustav J. Emerging Magnetic Resonance Imaging Techniques for Atherosclerosis Imaging Arteriosclerosis, thrombosis, and vascular biology 2019;39 (5):841-849 [PubMed]
  • de Jonge C S, Coolen B F, Peper E S, Motaal A G, Nio C Y, Somers I, Strijkers G J, Stoker J, Nederveen A J Evaluation of compressed sensing MRI for accelerated bowel motility imaging European Radiology Experimental 2019;3 (7) [PubMed]
  • Smits Loek P. From image to intervention: Innovation in cardiometabolic medicine 2019. 218p. ISBN 9789463803151. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Nieuwdorp M. , Nederveen A. J.; Co-supervisor: Coolen B. F.)
  • Cornelissen Bart M. W., Leemans Eva L., Coolen Bram F., Peper Eva S., van den Berg René, Marquering Henk A., Slump Cornelis H., Majoie Charles B. L. M. Insufficient slow-flow suppression mimicking aneurysm wall enhancement in magnetic resonance vessel wall imaging: a phantom study Neurosurgical focus 2019;47 (1):E19 [PubMed]
  • Zheng Kang H., Schoormans Jasper, Stiekema Lotte C. A., Calcagno Claudia, Cicha Iwona, Alexiou Christoph, Strijkers Gustav J., Nederveen Aart J., Stroes Erik S. G., Coolen Bram F. Plaque Permeability Assessed With DCE-MRI Associates With USPIO Uptake in Patients With Peripheral Artery Disease JACC. Cardiovascular imaging 2019;12 (10):2081-2083 [PubMed]
  • Maier Oliver, Schoormans Jasper, Schloegl Matthias, Strijkers Gustav J., Lesch Andreas, Benkert Thomas, Block Tobias, Coolen Bram F., Bredies Kristian, Stollberger Rudolf Rapid T1 quantification from high resolution 3D data with model-based reconstruction Magnetic resonance in medicine 2019;81 (3):2072-2089 [PubMed]
  • Zhang Qinwei, Coolen Bram F., Nederveen Aart J., Strijkers Gustav J. Three-dimensional Diffusion Imaging with SPiral Encoded Navigators from Stimulated Echoes (3D-DISPENSE) Magnetic resonance in medicine 2019;81 (2):1052-1065 [PubMed]

2018

  • Mazzoli Valentina, Gottwald Lukas M., Peper Eva S., Froeling Martijn, Coolen Bram F., Verdonschot Nico, Sprengers Andre M., van Ooij Pim, Strijkers Gustav J., Nederveen Aart J. Accelerated 4D phase contrast MRI in skeletal muscle contraction Magnetic resonance in medicine 2018;80 (5):1799-1811 [PubMed]
  • Peper Eva S., Strijkers Gustav J., Gazzola Katja, Potters Wouter V., Motaal Abdallah G., Luirink Ilse K., Hutten Barbara A., Wiegman Albert, van Ooij Pim, van den Born Bert-Jan H., Nederveen Aart J., Coolen Bram F. Regional assessment of carotid artery pulse wave velocity using compressed sensing accelerated high temporal resolution 2D CINE phase contrast cardiovascular magnetic resonance Journal of cardiovascular magnetic resonance 2018;20 (1) [PubMed]
  • Coolen Bram F., Calcagno Claudia, van Ooij Pim, Fayad Zahi A., Strijkers Gustav J., Nederveen Aart J. Vessel wall characterization using quantitative MRI: what's in a number? Magma (New York, N.Y.) 2018;31 (1):201-222 [PubMed]

2017

  • Mazzoli Valentina, Schoormans Jasper, Froeling Martijn, Sprengers Andre M., Coolen Bram F., Verdonschot Nico, Strijkers Gustav J., Nederveen Aart J. Accelerated 4D self-gated MRI of tibiofemoral kinematics NMR in biomedicine 2017;30 (11) [PubMed]
  • Zhang Qinwei, Coolen Bram F., Versluis Maarten J., Strijkers Gustav J., Nederveen Aart J. Diffusion-prepared stimulated-echo turbo spin echo (DPsti-TSE): An eddy current-insensitive sequence for three-dimensional high-resolution and undistorted diffusion-weighted imaging NMR in biomedicine 2017;30 (7) [PubMed]
  • Smits Loek P., Tiessens Feiko, Zheng Kang He, Stroes Erik S., Nederveen Aart J., Coolen Bram F. Evaluation of ultrasmall superparamagnetic iron-oxide (USPIO) enhanced MRI with ferumoxytol to quantify arterial wall inflammation Atherosclerosis 2017;263:211-218 [PubMed]
  • Liem Madieke I., Kennedy Fiona, Bonati Leo H., van der Lugt Aad, Coolen Bram F., Nederveen Aart J., Jager Hans R., Brown Martin M., Nederkoorn Paul J. Investigations of Carotid Stenosis to Identify Vulnerable Atherosclerotic Plaque and Determine Individual Stroke Risk Circulation journal 2017;81 (9):1246-1253 [PubMed]
  • Gao Shan, van't Klooster Ronald, Kitslaar Pieter H., Coolen Bram F., van den Berg Alexandra M., Smits Loek P., Shahzad Rahil, Shamonin Denis P., de Koning Patrick J. H., Nederveen Aart J., van der Geest Rob J. Learning-based automated segmentation of the carotid artery vessel wall in dual-sequence MRI using subdivision surface fitting Medical physics 2017;44 (10):5244-5259 [PubMed]

2016

  • Oudeman Jos, Coolen Bram F., Mazzoli Valentina, Maas Mario, Verhamme Camiel, Brink Wyger M., Webb Andrew G., Strijkers Gustav J., Nederveen Aart J. Diffusion-prepared neurography of the brachial plexus with a large field-of-view at 3T Journal of magnetic resonance imaging 2016;43 (3):644-654 [PubMed]
  • Zheng Kang He, van der Valk Fleur M., Smits Loek P., Sandberg Mara, Dasseux Jean-Louis, Baron Rudi, Barbaras Ronald, Keyserling Constance, Coolen Bram F., Nederveen Aart J., Verberne Hein J., Nell Thijs E., Vugts Danielle J., Duivenvoorden Raphaël, Fayad Zahi A., Mulder Willem J. M., van Dongen Guus A. M. S., Stroes Erik S. G. HDL mimetic CER-001 targets atherosclerotic plaques in patients Atherosclerosis 2016;251:381-388 [PubMed]
  • van der Bel René, Coolen Bram F., Nederveen Aart J., Potters Wouter V., Verberne Hein J., Vogt Liffert, Stroes Erik S. G., Krediet C. T. Paul Magnetic Resonance Imaging-Derived Renal Oxygenation and Perfusion During Continuous, Steady-State Angiotensin-II Infusion in Healthy Humans Journal of the American Heart Association 2016;5 (3):e003185 [PubMed]
  • Smits Loek P., Coolen Bram F., Panno Maria D., Runge Jurgen H., Nijhof Wouter H., Verheij Joanne, Nieuwdorp Max, Stoker Jaap, Beuers Ulrich H., Nederveen Aart J., Stroes Erik S. Noninvasive Differentiation between Hepatic Steatosis and Steatohepatitis with MR Imaging Enhanced with USPIOs in Patients with Nonalcoholic Fatty Liver Disease: A Proof-of-Concept Study Radiology 2016;278 (3):782-791 [PubMed]
  • Huizinga W., Poot D. H. J., Guyader J.-M., Klaassen R., Coolen B. F., van Kranenburg M., van Geuns R. J. M., Uitterdijk A., Polfliet M., Vandemeulebroucke J., Leemans A., Niessen W. J., Klein S. PCA-based groupwise image registration for quantitative MRI Medical image analysis 2016;29:65-78 [PubMed]
  • Coolen Bram F., Poot Dirk H. J., Liem Madieke I., Smits Loek P., Gao Shan, Kotek Gyula, Klein Stefan, Nederveen Aart J. Three-dimensional quantitative T1 and T2 mapping of the carotid artery: Sequence design and in vivo feasibility Magnetic resonance in medicine 2016;75 (3):1008-1017 [PubMed]

2015

  • Calcagno Claudia, Lobatto Mark E., Dyvorne Hadrien, Robson Philip M., Millon Antoine, Senders Max L., Lairez Olivier, Ramachandran Sarayu, Coolen Bram F., Black Alexandra, Mulder Willem J. M., Fayad Zahi A. Three-dimensional dynamic contrast-enhanced MRI for the accurate, extensive quantification of microvascular permeability in atherosclerotic plaques NMR in biomedicine 2015;28 (10):1304-1314 [PubMed]

2014

  • van Nierop Bastiaan J., Coolen Bram F., Bax Noortje A., Dijk Wouter J. R., van Deel Elza D., Duncker Dirk J., Nicolay Klaas, Strijkers Gustav J. Myocardial perfusion MRI shows impaired perfusion of the mouse hypertrophic left ventricle international journal of cardiovascular imaging 2014;30 (3):619-628 [PubMed]
  • Huizinga Wyke, Poot Dirk H. J., Guyader Jean-Marie, Smit Henk, van Kranenburg Matthijs, van Geuns Robert-Jan M., Uitterdijk Andre, van Beusekom Heleen M. M., Coolen Bram F., Leemans Alexander, Niessen Wiro J., Klein Stefan Non-rigid Groupwise Image Registration for Motion Compensation in Quantitative MRIin: Sébastien Ourselin, Marc Modat, editors. Biomedical Image Registration : 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014 : Proceedings. S.l.: Springer; 2014. p. 184-193, ISBN 9783319085548; 9783319085531
  • Coolen Bram F., Simonis Frank F. J., Geelen Tessa, Moonen Rik P. M., Arslan Fatih, Paulis Leonie E. M., Nicolay Klaas, Strijkers Gustav J. Quantitative T-2 Mapping of the Mouse Heart by Segmented MLEV Phase-Cycled T-2 Preparation Magnetic resonance in medicine 2014;72 (2):409-417 [PubMed]

2013

  • Motaal Abdallah G., Coolen Bram F., Abdurrachim Desiree, Castro Rui M., Prompers Jeanine J., Florack Luc M. J., Nicolay Klaas, Strijkers Gustav J. Accelerated high-frame-rate mouse heart cine-MRI using compressed sensing reconstruction NMR in biomedicine 2013;26 (4):451-457 [PubMed]
  • Paulis Leonie E., Klein Alexandra M., Ghanem Alexander, Geelen Tessa, Coolen Bram F., Breitbach Martin, Zimmermann Katrin, Nicolay Klaas, Fleischmann Bernd K., Roell Wilhelm, Strijkers Gustav J. Embryonic cardiomyocyte, but not autologous stem cell transplantation, restricts infarct expansion, enhances ventricular function, and improves long-term survival PLoS ONE 2013;8 (4):e61510 [PubMed]
  • Coolen Bram F., Abdurrachim Desiree, Motaal Abdallah G., Nicolay Klaas, Prompers Jeanine J., Strijkers Gustav J. High frame rate retrospectively triggered Cine MRI for assessment of murine diastolic function Magnetic resonance in medicine 2013;69 (3):648-656 [PubMed]
  • Geelen Tessa, Paulis Leonie E., Coolen Bram F., Nicolay Klaas, Strijkers Gustav J. Passive targeting of lipid-based nanoparticles to mouse cardiac ischemia-reperfusion injury Contrast media & molecular imaging 2013;8 (2):117-126 [PubMed]
  • van Nierop Bastiaan J., Coolen Bram F., Dijk Wouter J. R., Hendriks Arjan D., de Graaf Larry, Nicolay Klaas, Strijkers Gustav J. Quantitative first-pass perfusion MRI of the mouse myocardium Magnetic resonance in medicine 2013;69 (6):1735-1744 [PubMed]

2012

  • Geelen Tessa, Paulis Leonie E. M., Coolen Bram F., Nicolay Klaas, Strijkers Gustav J. Contrast-enhanced MRI of murine myocardial infarction - part I NMR in biomedicine 2012;25 (8):953-968 [PubMed]
  • Coolen Bram F., Paulis Leonie E. M., Geelen Tessa, Nicolay Klaas, Strijkers Gustav J. Contrast-enhanced MRI of murine myocardial infarction - part II NMR in biomedicine 2012;25 (8):969-984 [PubMed]
  • Paulis Leonie E., Geelen Tessa, Kuhlmann Michael T., Coolen Bram F., Schäfers Michael, Nicolay Klaas, Strijkers Gustav J. Distribution of lipid-based nanoparticles to infarcted myocardium with potential application for MRI-monitored drug delivery Journal of controlled release 2012;162 (2):276-285 [PubMed]
  • Wolters M., Oostendorp M., Coolen B. F., Post M. J., Janssen J. M. H., Strijkers G. J., Kooi M. E., Nicolay K., Backes W. H. Efficacy of positive contrast imaging techniques for molecular MRI of tumor angiogenesis Contrast media & molecular imaging 2012;7 (2):130-139 [PubMed]
  • Coolen Bram F. Novel strategies for mouse cardiac MRI - Better Stronger Faster 2012. 157p. ISBN 9789038631080. [UvA Dissertations Online] TU Eindhoven: Biomedical Engineering. (Supervisor: Nicolay K.; Co-supervisor: Strijkers G. J.)

2011

  • Coolen Bram F., Geelen Tessa, Paulis Leonie E. M., Nicolay Klaas, Strijkers Gustav J. Regional contrast agent quantification in a mouse model of myocardial infarction using 3D cardiac T1 mapping Journal of cardiovascular magnetic resonance 2011;13:56 [PubMed]
  • Coolen Bram F., Geelen Tessa, Paulis Leonie E. M., Nauerth Arno, Nicolay Klaas, Strijkers Gustav J. Three-dimensional T1 mapping of the mouse heart using variable flip angle steady-state MR imaging NMR in biomedicine 2011;24 (2):154-162 [PubMed]

2010

  • Coolen Bram F., Moonen Rik P. M., Paulis Leonie E. M., Geelen Tessa, Nicolay Klaas, Strijkers Gustav J. Mouse myocardial first-pass perfusion MR imaging Magnetic resonance in medicine 2010;64 (6):1658-1663 [PubMed]

2009

  • Coolen Bram F., Heijman Edwin, Nicolay Klaas, Strijkers Gustav J. On the use of steady-state signal equations for 2D TrueFISP imaging Magnetic resonance imaging 2009;27 (6):815-822 [PubMed]