J.C.J. Calis MD PhD publications

2021

• Nkosi-Gondwe Thandile, Calis Job, van Hensbroek Michael Boele, Bates Imelda, Blomberg Björn, Phiri Kamija S. A cohort analysis of survival and outcomes in severely anaemic children with moderate to severe acute malnutrition in Malawi PLoS ONE 2021;16 (2 February) [PubMed]

2020

• Huibers Minke H. W., Calis Job C., Allain Theresa J., Coupland Sarah E., Phiri Chimota, Phiri Kamija S., Swinkels Dorine W., van Hensbroek Michael Boele, Bates Imelda A possible role for hepcidin in the detection of iron deficiency in severely anaemic HIV-infected patients in Malawi PLoS ONE 2020;15 (2) [PubMed]
• Huibers Minke H. W., Bates Imelda, McKew Steve, Allain Theresa J., Coupland Sarah E., Phiri Chimota, Phiri Kamija S., van Hensbroek Michael Boele, Calis Job C. Severe anaemia complicating HIV in Malawi; Multiple co-existing aetiologies are associated with high mortality PLoS ONE 2020;15 (2) [PubMed]
• Boele van Hensbroek Michaël, Smit Menno R., Brabin Bernard J., Calis Job C. J., van der Kuip Martijn, Meels Nina, Nieuwenhuijs Linde, Voskuijl Wieger P., van Weissenbruch Mirjam M., van Woensel Jacobus B. M., de Baat Tessa, Huibers Minke H. W., Tutu-van Furth marceline M. Two Decades of Global Child Health at Amsterdam UMC Amsterdam Centre for Global Child Health; 2020. 90p. ISBN 9789083105802

2019

• Wiegers Hanke M. G., van Nijen Lisa, van Woensel Job B. M., Bem Reinout A., de Jong Menno D., Calis Job C. J. Bacterial co-infection of the respiratory tract in ventilated children with bronchiolitis; A retrospective cohort study BMC infectious diseases 2019;19 (1) [PubMed]
• Brouwer Lieke, Karelehto Eveliina, Han Alvin X., Thomas Xiomara V., Bruning Andrea H. L., Calis Job C. J., van Hensbroek Michaël Boele, Westerhuis Brenda M., Amarthalingam Darsha, Koekkoek Sylvie M., Rebers Sjoerd P. H., Phiri Kamija S., Wolthers Katja C., Pajkrt Dasja High frequency and diversity of parechovirus A in a cohort of Malawian children Archives of virology 2019;164 (3):799-806 [PubMed]
• Huibers Minke HIV-infection in sub-Saharan Africa: From quantity to quality of care 2019. 205p. ISBN 9789463755375. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Boele van Hensbroek M.; Co-supervisors: Calis J. C. J. , Bates I.)
• Huibers M. H. W., Kityo C., Boerma R. S., Kaudha E., Sigaloff K. C. E., Balinda S. N., Bertagnolio S., Nakanjako R., Mugyenyi P., Calis J. C. J., Boele van Hensbroek M., Rinke de Wit T. F. Long-term virological outcomes, failure and acquired resistance in a large cohort of Ugandan children Journal of antimicrobial chemotherapy 2019;74 (10):3035-3043 [PubMed]

2018

• Brouwer Lieke, van der Sanden Sabine M. G., Calis Job C. J., Bruning Andrea H. L., Wang Steven, Wildenbeest Joanne G., Rebers Sjoerd P. H., Phiri Kamija S., Westerhuis Brenda M., van Hensbroek Michaël Boele, Pajkrt Dasja, Wolthers Katja C. High frequency of Polio-like Enterovirus C strains with differential clustering of CVA-13 and EV-C99 subgenotypes in a cohort of Malawian children Archives of virology 2018;163 (10):2645-2653 [PubMed]
• Huibers M. H. W., Moons P., Cornelissen M., Zorgdrager F., Maseko N., Gushu M. B., Iwajomo O. H., Boele van Hensbroek M., Calis J. C. J. High prevalence of virological failure and HIV drug mutations in a first-line cohort of Malawian children Journal of antimicrobial chemotherapy 2018;73 (12):3471-3475 [PubMed]
• Huibers Minke H. W., Moons Peter, Maseko Nelson, Gushu Monfort B., Iwajomo Oluwadamilola H., Heyderman Robert S., Boele van Hensbroek Michael, Brienen Eric A., van Lieshout Lisette, Calis Job C. J. Multiplex Real-time PCR Detection of Intestinal Protozoa in HIV-infected Children in Malawi: Enterocytozoon Bieneusi Is Common and Associated With Gastrointestinal Complaints and May Delay BMI (Nutritional Status) Recovery Pediatric infectious disease journal 2018;37 (9):910-915 [PubMed]
• Inzaule Seth C., Hamers Raph L., Calis Job, Boerma Ragna, Sigaloff Kim, Zeh Clement, Mugyenyi Peter, Akanmu Sulaimon, Rinke de Wit Tobias F. When prevention of mother-to-child HIV transmission fails: preventing pretreatment drug resistance in African children AIDS (London, England) 2018;32 (2):143-147 [PubMed]

2017

• Boerma R. S., Sigaloff K. C. E., Akanmu A. S., Inzaule S., Boele van Hensbroek M., Rinke de Wit T. F., Calis J. C. Alarming increase in pretreatment HIV drug resistance in children living in sub-Saharan Africa: a systematic review and meta-analysis Journal of antimicrobial chemotherapy 2017;72 (2):365-371 [PubMed]
• Ingelse Sarah A., Wiegers Hanke M. G., Calis Job C., van Woensel Job B., Bem Reinout A. Early Fluid Overload Prolongs Mechanical Ventilation in Children With Viral-Lower Respiratory Tract Disease Pediatric critical care medicine 2017;18 (3):e106-e111 [PubMed]
• Boerma Ragna S., Bunupuradah Torsak, Dow Dorothy, Fokam Joseph, Kariminia Azar, Lehman Dara, Kityo Cissy, Musiime Victor, Palumbo Paul, Schoffelen Annelot, Sophan Sam, Zanoni Brian, Rinke de Wit Tobias F., Calis Job C. J., Sigaloff Kim C. E. Multicentre analysis of second-line antiretroviral treatment in HIV-infected children: adolescents at high risk of failure Journal of the International AIDS Society 2017;20 (1):21930-- [PubMed]
• Cortjens Bart, Ingelse Sarah A., Calis Job C., Vlaar Alexander P., Koenderman Leo, Bem Reinout A., van Woensel Job B. Neutrophil subset responses in infants with severe viral respiratory infection Clinical immunology (Orlando, Fla.) 2017;176:100-106 [PubMed]
• Veldhoen Esther S., Smulders Charlotte A., Kappen Teus H., Calis Job C., van Woensel Job, Raymakers-Janssen Paulien A. M., Bont Louis J., Hennus Marije P. Post-extubation stridor in Respiratory Syncytial Virus bronchiolitis: Is there a role for prophylactic dexamethasone? PLoS ONE 2017;12 (2):e0172096 [PubMed]
• Kityo Cissy, Boerma Ragna S., Sigaloff Kim C. E., Kaudha Elizabeth, Calis Job C. J., Musiime Victor, Balinda Sheila, Nakanjako Rita, Boender T. Sonia, Mugyenyi Peter N., Rinke de Wit Tobias F. Pretreatment HIV drug resistance results in virological failure and accumulation of additional resistance mutations in Ugandan children Journal of antimicrobial chemotherapy 2017;72 (9):2587-2595 [PubMed]
• Boerma Ragna S. Prevention, suppression, and resistance: Antiretroviral treatment for children with HIV in Sub-Saharan Africa 2017. 256p. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Rinke de Wit T. F., Boele van Hensbroek M.; Co-supervisors: Calis J. C. J., Sigaloff K. C. E.)
• Boerma Ragna S., Kityo Cissy, Boender T. Sonia, Kaudha Elizabeth, Kayiwa Joshua, Musiime Victor, Mukuye Andrew, Kiconco Mary, Nankya Immaculate, Nakatudde Lilian, Mugyenyi Peter N., Boele van Hensbroek Michael, Rinke de Wit Tobias F., Sigaloff Kim C. E., Calis Job C. J. Second-line HIV Treatment in Ugandan Children: Favorable Outcomes and No Protease Inhibitor Resistance Journal of tropical pediatrics 2017;63 (2):135-143 [PubMed]

2016

• Boender T. Sonia, Kityo Cissy M., Boerma Ragna S., Hamers Raph L., Ondoa Pascale, Wellington Maureen, Siwale Margaret, Nankya Immaculate, Kaudha Elizabeth, Akanmu Alani Sulaimon, Botes Mariette E., Steegen Kim, Calis Job C. J., Rinke de Wit Tobias F., Sigaloff Kim C. E. Accumulation of HIV-1 drug resistance after continued virological failure on first-line ART in adults and children in sub-Saharan Africa Journal of antimicrobial chemotherapy 2016;71 (10):2918-2927 [PubMed]
• Huibers Minke H. W., Moons Peter, Maseko Nelson, Gushu Montfort B., Wit Ferdinand W., Graham Steve M., van Hensbroek Michael Boele, Calis Job C. An Evaluation of Alternative Markers to Guide Initiation of Anti-retroviral Therapy in HIV-Infected Children in Settings where CD4 Assays are not Available Journal of tropical pediatrics 2016;62 (1):19-28 [PubMed]
• Boerma Ragna S., Boender T. Sonia, Sigaloff Kim C. E., Rinke de Wit Tobias F., van Hensbroek Michael Boele, Ndembi Nicaise, Adeyemo Titilope, Temiye Edamisan O., Osibogun Akin, Ondoa Pascale, Calis Job C., Akanmu Alani Sulaimon High levels of pre-treatment HIV drug resistance and treatment failure in Nigerian children Journal of the International AIDS Society 2016;19 (1):21140 [PubMed]
• Kityo Cissy, Sigaloff Kim Catherina Eve, Sonia Boender Tamara, Kaudha Elizabeth, Kayiwa Joshua, Musiime Victor, Mukuye Andrew, Kiconco Mary, Nankya Immaculate, Nakatudde-Katumba Llilian, Calis Job C. J., Rinke de Wit Tobias F., Mugyenyi Peter N. HIV Drug Resistance Among Children Initiating First-Line Antiretroviral Treatment in Uganda AIDS research and human retroviruses 2016;32 (7):628-635 [PubMed]
• Boender Sonia Long-term effects of HIV treatment in sub-Saharan Africa: from access to quality 2016. 265p. ISBN 9789461698414. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Rinke de Wit T. F., Boele van Hensbroek M.; Co-supervisors: Sigaloff K. C. E., Calis J. C. J.)
• Calis Job Cj, Phiri Kamija S., Faragher E. Brian, Brabin Bernard J., Bates Imelda, Cuevas Luis E., de Haan Rob J., Phiri Ajib I., Malange Pelani, Khoka Mirriam, Hulshof Paul Jm, van Lieshout Lisette, Beld Marcel Ghm, teo Yik Y., Rockett Kirk A., Richardson Anna, Kwiatkowski Dominic P., Molyneux Malcolm E., van Hensbroek Michaël Boele Severe anemia in Malawian children Malawi medical journal 2016;28 (3):99-107 [PubMed]
• Boerma Ragna S., Boender T. Sonia, Bussink Anton P., Calis Job C. J., Bertagnolio Silvia, Rinke de Wit Tobias F., Boele van Hensbroek Michael, Sigaloff Kim C. E. Suboptimal Viral Suppression Rates Among HIV-Infected Children in Low- and Middle-Income Countries: A Meta-analysis Clinical infectious diseases 2016;63 (12):1645-1654 [PubMed]

2014

• Jonker Femkje A. M., Boele van Hensbroek Michael, Leenstra Tjalling, Vet Raymond J. W. M., Brabin Bernard J., Maseko Nelson, Gushu Montfort B., Emana Mercy, Kraaijenhagen Rob, Tjalsma Harold, Swinkels Dorine W., Calis Job C. J. Conventional and novel peripheral blood iron markers compared against bone marrow in Malawian children Journal of clinical pathology 2014;67 (8):717-723 [PubMed]
• Kyeyune Francis X., Calis Job C. J., Phiri Kamija S., Faragher Brian, Kachala David, Brabin Bernard J., Boele van Hensbroek Michaël The interaction between malaria and human immunodeficiency virus infection in severely anaemic Malawian children: a prospective longitudinal study Tropical medicine & international health 2014;19 (6):698-705 [PubMed]

2013

• Sigaloff Kim C. E. HIV drug resistance among adults and children in sub-Saharan Africa 2013. 295p. ISBN 9789461693334. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Rinke de Wit T. F.; Co-supervisors: van Vugt M., Calis J. C. J.)
• Jonker Femkje A. M., Calis Job C. J., Phiri Kamija, Kraaijenhagen Rob J., Brabin Bernard J., Faragher Brian, Wiegerinck Erwin T., Tjalsma Harold, Swinkels Dorine W., van Hensbroek Michael Boele Low hepcidin levels in severely anemic malawian children with high incidence of infectious diseases and bone marrow iron deficiency PLoS ONE 2013;8 (12):e78964 [PubMed]
• Calis Job, van Woensel Job, Lemson Joris Severe sepsis and septic shock New England journal of medicine 2013;369 (21):2062 [PubMed]
• Sigaloff Kim C. E., Kayiwa Joshua, Musiime Victor, Calis Job C. J., Kaudha Elizabeth, Mukuye Andrew, Matama Christine, Nankya Immaculate, Nakatudde Lillian, Dekker John T., Hamers Raph L., Mugyenyi Peter, Rinke de Wit Tobias F., Kityo Cissy Short communication: high rates of thymidine analogue mutations and dual-class resistance among HIV-infected Ugandan children failing first-line antiretroviral therapy AIDS research and human retroviruses 2013;29 (6):925-930 [PubMed]

2012

• Jonker Femkje A. M. Anaemia, iron deficiency and infections. New perceptions of the interaction between hepcidin, iron biomarkers, anaemia and inflammation in Malawian children 2012. 144p. ISBN 9789491456213. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Brabin B. J.; Co-supervisors: Boele van Hensbroek M., Calis J. C. J.)
• Boender T. Sonia, Sigaloff Kim C. E., Kayiwa Joshua, Musiime Victor, Calis Job C. J., Hamers Raph L., Nakatudde Lillian Katumba, Khauda Elizabeth, Mukuye Andrew, Ditai James, Geelen Sibyl P., Mugyenyi Peter, Rinke de Wit Tobias F., Kityo Cissy Barriers to Initiation of Pediatric HIV Treatment in Uganda: A Mixed-Method Study AIDS research and treatment 2012;2012:817506 [PubMed]
• Esan Michael O., Jonker Femkje A. M., Hensbroek Michael Boele van, Calis Job C. J., Phiri Kamija S. Iron deficiency in children with HIV-associated anaemia: a systematic review and meta-analysis Transactions of the Royal Society of Tropical Medicine and Hygiene 2012;106 (10):579-587 [PubMed]
• Jonker Femkje A. M., Calis Job C. J., Boele van Hensbroek Michael, Phiri Kamija, Geskus Ronald B., Brabin Bernard J., Leenstra Tjalling Iron Status Predicts Malaria Risk in Malawian Preschool Children PLoS ONE 2012;7 (8):e42670 [PubMed]
• Jonker Femkje A. M., Calis Job C. J., Phiri Kamija, Brienen Eric A. T., Khoffi Harriet, Brabin Bernard J., Verweij Jaco J., van Hensbroek Michael Boele, van Lieshout Lisette Real-time PCR Demonstrates Ancylostoma duodenale Is a Key Factor in the Etiology of Severe Anemia and Iron Deficiency in Malawian Pre-school Children PLoS neglected tropical diseases 2012;6 (3):e1555 [PubMed]

2011

• Sigaloff Kim C. E., Calis Job C. J., Geelen Sibyl P., van Vugt Michèle, de Wit Tobias F. Rinke HIV-1-resistance-associated mutations after failure of first-line antiretroviral treatment among children in resource-poor regions: a systematic review Lancet infectious diseases 2011;11 (10):769-779 [PubMed]

2010

• Calis Job C. J., Phiri Kamija S., Vet Raymond J. W. M., de Haan Rob J., Munthali Francis, Kraaijenhagen Robert J., Hulshof Paul J. M., Molyneux Malcolm E., Brabin Bernard J., Boele van Hensbroek Michaël, Bates Imelda Erythropoiesis in HIV-infected and uninfected Malawian children with severe anemia AIDS (London, England) 2010;24 (18):2883-2887 [PubMed]
• Boele van Hensbroek Michaël, Calis Job C. J., Phiri Kamija S., Vet Raymond, Munthali Francis, Kraaijenhagen Rob, van den Berg Henk, Faragher Brian, Bates Imelda, Molyneux Malcolm E. Pathophysiological mechanisms of severe anaemia in Malawian children PLoS ONE 2010;5 (9):e12589 [PubMed]

2009

• Phiri K. S., Calis J. C. J., Kachala D., Borgstein E., Waluza J., Bates I., Brabin B., Boele van Hensbroek M. Improved method for assessing iron stores in the bone marrow Journal of clinical pathology 2009;62 (8):685-689 [PubMed]
• Phiri K. S., Calis J. C. J., Siyasiya A., Bates I., Brabin B., Boele van Hensbroek M. New cut-off values for ferritin and soluble transferrin receptor for the assessment of iron deficiency in children in a high infection pressure area Journal of clinical pathology 2009;62 (12):1103-1106 [PubMed]

2008

• Calis Job C. J. Aetiology, pathogenesis & consequences of severe anaemia in Malawian children. HIV and other factors 2008. 183p. ISBN 9789090228860. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Brabin B. J.; Co-supervisor: Boele van Hensbroek M.)
• Calis Job C. J., Boele van Hensbroek Michaël, de Haan Rob J., Moons Peter, Brabin Bernard J., Bates Imelda HIV-associated anemia in children: a systematic review from a global perspective AIDS (London, England) 2008;22 (10):1099-1112 [PubMed]
• Phiri Kamija S., Calis Job C. J., Faragher Brian, Nkhoma Ernest, Ng'oma Kondwani, Mangochi Bridget, Molyneux Malcolm E., van Hensbroek Michaël Boele Long term outcome of severe anaemia in Malawian children PLoS ONE 2008;3 (8):e2903-- [PubMed]
• Calis Job C. J., Rotteveel Hellen P., van der Kuyl Antoinette C., Zorgdrager Fokla, Kachala David, Boele van Hensbroek Michael, Cornelissen Marion Severe anaemia is not associated with HIV-1 env gene characteristics in Malawian children BMC infectious diseases 2008;8:26 [PubMed]
• Calis Job C. J., Phiri Kamija S., Faragher E. Brian, Brabin Bernard J., Bates Imelda, Cuevas Luis E., de Haan Rob J., Phiri Ajib I., Malange Pelani, Khoka Mirriam, Hulshof Paul J. M., van Lieshout Lisette, Beld Marcel G. H. M., teo Yik Y., Rockett Kirk A., Richardson Anna, Kwiatkowski Dominic P., Molyneux Malcolm E., Boele van Hensbroek Michael Severe anemia in Malawian children New England journal of medicine 2008;358 (9):888-899 [PubMed]

2005

• Milledge J., Calis J. C. J., Graham S. M., Phiri A., Wilson L. K., Soko D., Mbvwinji M., Walsh A. L., Rogerson S. R., Molyneux M. E., Molyneux E. M. Aetiology of neonatal sepsis in Blantyre, Malawi: 1996-2001 Annals of tropical paediatrics 2005;25 (2):101-110 [PubMed]

2002

• Calis Jcj, Bakker M. L., Elens R. B., Borgdorff M., Harries A. D. Mortality in smear-negative tuberculosis patients in Phalombe Malawi medical journal 2002;14 (2):13-14 [PubMed]