M.F. Jebbink BSc publications

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Publications BSc M.F. Jebbink

Position
Support Staff
Main activities
Education, Research
Specialisation
Molecular Biology/Virology
Focus of research

To discover and characterize new pathogens (mainly virusses) in patient material using state of the art techniques, like deep sequencing etc.

2020

  • Kinsella Cormac M., Bart Aldert, Deijs Martin, Broekhuizen Patricia, Kaczorowska Joanna, Jebbink Maarten F., van Gool Tom, Cotten Matthew, van der Hoek Lia Entamoeba and Giardia parasites implicated as hosts of CRESS viruses Nature communications 2020;11 (1) [PubMed]
  • Edridge Arthur W. D., Kaczorowska Joanna, Hoste Alexis C. R., Bakker Margreet, Klein Michelle, Loens Katherine, Jebbink Maarten F., Matser Amy, Kinsella Cormac M., Rueda Paloma, Ieven Margareta, Goossens Herman, Prins Maria, Sastre Patricia, Deijs Martin, van der Hoek Lia Seasonal coronavirus protective immunity is short-lasting Nature medicine 2020;26 (11):1691-1693 [PubMed]
  • Hoste Alexis C. R., Venteo Angel, Fresco-Taboada Alba, Tapia Istar, Monedero Alejandro, López Lissette, Jebbink Maarten F., Pérez-Ramírez Elisa, Jimenez-Clavero Miguel Angel, Almonacid Mercedes, Muñoz Patricia, Guinea Jesus, Vela Carmen, van der Hoek Lia, Rueda Paloma, Sastre Patricia Two serological approaches for detection of antibodies to SARS-CoV-2 in different scenarios: a screening tool and a point-of-care test Diagnostic microbiology and infectious disease 2020;98 (4) [PubMed]

2019

  • Edridge Arthur W. D., Deijs Martin, Namazzi Ruth, Cristella Cosimo, Jebbink Maarten F., Maurer Irma, Kootstra Neeltje A., Buluma Linda R., van Woensel Job B. M., de Jong Menno D., Idro Richard, Boele van Hensbroek Michael, van der Hoek Lia Novel Orthobunyavirus Identified in the Cerebrospinal Fluid of a Ugandan Child With Severe Encephalopathy Clinical infectious diseases 2019;68 (1):139-142 [PubMed]
  • Edridge Arthur W. D., Deijs Martin, van Zeggeren Ingeborg E., Kinsella Cormac M., Jebbink Maarten F., Bakker Margreet, van de Beek Diederik, Brouwer Matthijs C., van der Hoek Lia Viral metagenomics on cerebrospinal fluid Genes 2019;10 (5) [PubMed]

2018

  • Berto A., Anh P. H., Carrique-Mas J. J., Simmonds P., van Cuong N., Tue N. T., van Dung N., Woolhouse M. E., Smith I., Marsh G. A., Bryant J. E., Thwaites G. E., Baker S., Rabaa M. A., Kiet Bach Tuan, Boni Maciej F., Phu Bui Duc, Campbell James I., Hung Dang Manh, Huong Dang Thao, Oanh Dang Tram, Day Jeremy N., van Tan Dinh, van Doorn H. Rogier, Han Duong An, Farrar Jeremy J., Trang Hau Thi Thu, Nghia Ho Dang Trung, Long Hoang Bao, van Duong Hoang, Thu Huynh Thi Kim, Cuong Lam Chi, Hung Manh, Phuong Thanh, Phuc Thi, Phuong Thi, Luat Xuan, Ha Luu Thi Thu, van Chuong Ly, Loan Mai Thi Phuoc, Nadjm Behzad, Bao Ngo Thanh, Tu Nguyen Canh, Thuan Nguyen Dac, Dong Nguyen, Chuyen Nguyen Khac, An Nguyen Ngoc, van der Hoek Lia, Deijs Martin, Jebbink Maarten F. Detection of potentially novel paramyxovirus and coronavirus viral RNA in bats and rats in the Mekong Delta region of southern Viet Nam Zoonoses and public health 2018;65 (1):30-42 [PubMed]
  • van Hemert Formijn, Jebbink Maarten, van der Ark Andries, Scholer Frits, Berkhout Ben Euclidean distance analysis enables nucleotide skew analysis in viral genomes Computational and Mathematical Methods in Medicine 2018;2018 [PubMed]
  • Berto A., Pham H. A., Thao T. T. N., Vy N. H. T., Caddy S. L., Hiraide R., Tue N. T., Goodfellow I., Carrique-Mas J. J., Thwaites G. E., Baker S., Boni M. F., Kiet Bach Tuan, Bryant Juliet E., Phu Bui Duc, Campbell James I., Hung Dang Manh, Huong Dang Thao, Oanh Dang Tram, Day Jeremy N., van Tan Dinh, van Doorn H. Rogier, Han Duong An, Farrar Jeremy J., Trang Hau Thi Thu, Nghia Ho Dang Trung, Long Hoang Bao, van Duong Hoang, Thu Huynh Thi Kim, Cuong Lam Chi, Hung Manh, Phuong Thanh, Phuc Thi, Phuong Thi, Luat Xuan, Ha Luu Thi Thu, van Chuong Ly, Loan Mai Thi Phuoc, Nadjm Behzad, Bao Ngo Thanh, Hoa Ngo Thi, Tu Nguyen Canh, Thuan Nguyen Dac, Dong Nguyen, Chuyen Nguyen Khac, An Nguyen Ngoc, Vinh Nguyen Ngoc, van der Hoek Lia, Deijs Martin, Jebbink Maarten F. Hepatitis E in southern Vietnam: Seroepidemiology in humans and molecular epidemiology in pigs Zoonoses and public health 2018;65 (1):43-50 [PubMed]

2016

  • Oude Munnink Bas B., Cotten Matthew, Canuti Marta, Deijs Martin, Jebbink Maarten F., van Hemert Formijn J., Phan My V. T., Bakker Margreet, Jazaeri Farsani Seyed Mohammad, Kellam Paul, van der Hoek Lia A Novel Astrovirus-Like RNA Virus Detected in Human Stool Virus evolution 2016;2 (1):vew005 [PubMed]
  • Oude Munnink Bas B., Phan My V.T., Kellam Paul, Cotten Matthew, Kiet Bach Tuan, Baker Stephen, Berto Alessandra, Boni Maciej F., Bryant Juliet E., Phu Bui Duc, Campbell James I., Carrique-Mas Juan, Hung Dang Manh, Huong Dang Thao, Oanh Dang Tram, Day Jeremy N., Van Tan Dinh, van Doorn H. Rogier, Han Duong An, Farrar Jeremy J., Thu Trang Hau Thi, Trung Nghia Ho Dang, Long Hoang Bao, Van Duong Hoang, Thu Huynh Thi Kim, Cuong Lam Chi, Hung Le Manh, Phuong Le Thanh, Phuc Le Thi, Luat Le Xuan, Thu Ha Luu Thi, Van Chuong Ly, Loan Mai Thi Phuoc, Nadjm Behzad, Bao Ngo Thanh, Hoa Ngo Thi, Tue Ngo Tri, Tu Nguyen Canh, Thuan Nguyen Dac, Dong Nguyen, Chuyen Nguyen Khac, An Nguyen Ngoc, Vinh Nguyen Ngoc, Hung Nguyen Quoc, Dung Nguyen Thanh, Minh Nguyen Thanh, Binh Nguyen Thi, Deijs Martin, van der Hoek Lia, Jebbink Maarten F. Complete genome characterization of two wild-type measles viruses from Vietnamese infants during the 2014 outbreak Genome announcements 2016;4 (2)

2015

  • Oude Munnink Bas B., Cotten Matthew, Deijs Martin, Jebbink Maarten F., Bakker Margreet, Farsani Seyed Mohammad Jazaeri, Canuti Marta, Kellam Paul, van der Hoek Lia A novel genus in the order Picornavirales detected in human stool Journal of general virology 2015;96 (11):3440-3443 [PubMed]
  • Jazaeri Farsani Seyed Mohammad, Oude Munnink Bas B., Canuti Marta, Deijs Martin, Cotten Matthew, Jebbink Maarten F., Verhoeven Joost, Kellam Paul, Loens Katherine, Goossens Herman, Ieven Margareta, van der Hoek Lia Identification of a novel human rhinovirus C type by antibody capture VIDISCA-454 Viruses 2015;7 (1):239-251 [PubMed]
  • Canuti Marta, Buka Stephen, Jazaeri Farsani Seyed Mohammad, Oude Munnink Bas B., Jebbink Maarten F., van Beveren Nico J. M., de Haan Lieuwe, Goldstein Jill, Seidman Larry J., Tsuang Ming T., Storosum Jitschak G., van der Hoek Lia Reduced maternal levels of common viruses during pregnancy predict offspring psychosis: potential role of enhanced maternal immune activity? Schizophrenia research 2015;166 (1-3):248-254 [PubMed]
  • Canuti Marta, van Beveren Nico J. M., Jazaeri Farsani Seyed Mohammad, de Vries Michel, Deijs Martin, Jebbink Maarten F., Zaaijer Hans L., van Schaik Barbera D. C., van Kampen Antoine H. C., van der Kuyl Antoinette C., de Haan Lieuwe, Storosum Jitschak G., van der Hoek Lia Viral metagenomics in drug-naïve, first-onset schizophrenia patients with prominent negative symptoms Psychiatry research 2015;229 (3):678-684 [PubMed]

2014

  • Shaukat Shahzad, Angez Mehar, Alam Muhammad Masroor, Jebbink Maarten F., Deijs Martin, Canuti Marta, Sharif Salmaan, de Vries Michel, Khurshid Adnan, Mahmood Tariq, van der Hoek Lia, Zaidi Syed Sohail Zahoor Identification and characterization of unrecognized viruses in stool samples of non-polio acute flaccid paralysis children by simplified VIDISCA Virology journal 2014;11 (1):146 [PubMed]
  • Canuti Marta, Deijs Martin, Jazaeri Farsani Seyed M., Holwerda Melle, Jebbink Maarten F., de Vries Michel, van Vugt Saskia, Brugman Curt, Verheij Theo, Lammens Christine, Goossens Herman, Loens Katherine, Ieven Margareta, van der Hoek Lia Metagenomic analysis of a sample from a patient with respiratory tract infection reveals the presence of a gamma-papillomavirus Frontiers in microbiology 2014;5:347 [PubMed]
  • Canuti Marta, Williams Cathy V., Gadi Sashi R., Jebbink Maarten F., Oude Munnink Bas B., Jazaeri Farsani Seyed Mohammad, Cullen John M., van der Hoek Lia Persistent viremia by a novel parvovirus in a slow loris (Nycticebus coucang) with diffuse histiocytic sarcoma Frontiers in microbiology 2014;5:655 [PubMed]
  • Oude Munnink Bas B., Canuti Marta, Deijs Martin, de Vries Michel, Jebbink Maarten F., Rebers Sjoerd, Molenkamp Richard, van Hemert Formijn J., Chung Kevin, Cotten Matthew, Snijders Fransje, Sol Cees J. A., van der Hoek Lia Unexplained diarrhoea in HIV-1 infected individuals BMC infectious diseases 2014;14 (1):22 [PubMed]

2013

  • Tan Le Van, van Doorn H. Rogier, Nghia Ho Dang Trung, Chau Tran Thi Hong, Tu Le Thi Phuong, de Vries Michel, Canuti Marta, Deijs Martin, Jebbink Maarten F., Baker Stephen, Bryant Juliet E., Tham Nguyen Thi, Bkrong Nguyen Thi Thuy Chinh, Boni Maciej F., Loi Tran Quoc, Phuong Le Thi, Verhoeven Joost T. P., Crusat Martin, Jeeninga Rienk E., Schultsz Constance, Chau Nguyen Van Vinh, Hien Tran Tinh, van der Hoek Lia, Farrar Jeremy, de Jong Menno D. Identification of a new cyclovirus in cerebrospinal fluid of patients with acute central nervous system infections mBio 2013;4 (3):e00231-e00213 [PubMed]
  • Jazaeri Farsani Seyed Mohammad, Jebbink Maarten F., Deijs Martin, Canuti Marta, van Dort Karel A., Bakker Margreet, Grady Bart P. X., Prins Maria, van Hemert Formijn J., Kootstra Neeltje A., van der Hoek Lia Identification of a new genotype of Torque Teno Mini virus Virology journal 2013;10 (1):323 [PubMed]
  • Dijkman Ronald, Jebbink Maarten F., Koekkoek Sylvie M., Deijs Martin, Jónsdóttir Hulda R., Molenkamp Richard, Ieven Margareta, Goossens Herman, Thiel Volker, van der Hoek Lia Isolation and characterization of current human coronavirus strains in primary human epithelial cell cultures reveal differences in target cell tropism Journal of virology 2013;87 (11):6081-6090 [PubMed]

2012

  • Dijkman Ronald, Jebbink Maarten F., Deijs Martin, Milewska Aleksandra, Pyrc Krzysztof, Buelow Elena, van der Bijl Anna, van der Hoek Lia Replication-dependent downregulation of cellular angiotensin-converting enzyme 2 protein expression by human coronavirus NL63 Journal of general virology 2012;93 (9):1924-1929 [PubMed]
  • Dijkman Ronald, Jebbink Maarten F., Gaunt Eleanor, Rossen John W. A., Templeton Kate E., Kuijpers Taco W., van der Hoek Lia The dominance of human coronavirus OC43 and NL63 infections in infants Journal of clinical virology 2012;53 (2):135-139 [PubMed]
  • Farsani Seyed Mohammad Jazaeri, Dijkman Ronald, Jebbink Maarten F., Goossens Herman, Ieven Margareta, Deijs Martin, Molenkamp Richard, van der Hoek Lia The first complete genome sequences of clinical isolates of human coronavirus 229E Virus genes 2012;45 (3):433-439 [PubMed]

2011

  • de Vries Michel, Deijs Martin, Canuti Marta, van Schaik Barbera D. C., Faria Nuno R., van de Garde Martijn D. B., Jachimowski Loes C. M., Jebbink Maarten F., Jakobs Marja, Luyf Angela C. M., Coenjaerts Frank E. J., Claas Eric C. J., Molenkamp Richard, Koekkoek Sylvie M., Lammens Christine, Leus Frank, Goossens Herman, Ieven Margareta, Baas Frank, van der Hoek Lia A Sensitive Assay for Virus Discovery in Respiratory Clinical Samples PLoS ONE 2011;6 (1):e16118 [PubMed]
  • Sastre Patricia, Dijkman Ronald, Camuñas Ana, Ruiz Tamara, Jebbink Maarten F., van der Hoek Lia, Vela Carmen, Rueda Paloma Differentiation between Human Coronaviruses NL63 and 229E Using a Novel Double-Antibody Sandwich Enzyme-Linked Immunosorbent Assay Based on Specific Monoclonal Antibodies Clinical and vaccine immunology 2011;18 (1):113-118 [PubMed]

2009

  • Dijkman Ronald, Mulder H. Lie, Rumping Lynne, Kraaijvanger Ilse, Deijs Martin, Jebbink Maarten F., Verschoor Ernst J., van der Hoek Lia Seroconversion to HCoV-NL63 in Rhesus Macaques Viruses 2009;1 (3):647-656 [PubMed]

2008

  • Pyrc Krzysztof, Jebbink Maarten F., Berkhout Ben, van der Hoek Lia Detection of New Viruses by VIDISCA : Virus Discovery Based on cDNA-Amplified Fragment Length Polymorphism Methods in molecular biology (Clifton, N.J.) 2008;454:1-17 [PubMed]
  • Dijkman Ronald, Jebbink Maarten F., Bahia El Idrissi Nawal, Pyrc Krzysztof, Mueller Marcel A., Kuijpers Taco W., Zaaijer Hans L., van der Hoek Lia Human coronavirus NL63 and 229E seroconversion in children Journal of clinical microbiology 2008;46 (7):2368-2373 [PubMed]
  • de Vries Michel, Pyrc Krzysztof, Berkhout Ron, Vermeulen-Oost Wilma, Dijkman Ronald, Jebbink Maarten F., Bruisten Sylvia, Berkhout Ben, van der Hoek Lia Human parechovirus type 1, 3, 4, 5, and 6 detection in picornavirus cultures Journal of clinical microbiology 2008;46 (2):759-762 [PubMed]

2007

  • van der Hoek Lia, Pollakis Georgios, Lukashov Vladimir V., Jebbink Maarten F., Jeeninga Rienk E., Bakker Margreet, Dukers Nicole, Jurriaans Suzanne, Paxton William A., Back Nicole K. T., Berkhout Ben Characterization of an HIV-1 group M variant that is distinct from the known subtypes AIDS research and human retroviruses 2007;23 (3):466-470 [PubMed]

2006

  • Dijkman Ronald, Jebbink Maarten F., Wilbrink Berry, Pyrc Krzysztof, Zaaijer Hans L., Minor Philip D., Franklin Sally, Berkhout Ben, Thiel Volker, van der Hoek Lia Human coronavirus 229E encodes a single ORF4 protein between the spike and the envelope genes Virology journal 2006;3:106 [PubMed]
  • van der Hoek Lia, Sure Klaus, Ihorst Gabriele, Stang Alexander, Pyrc Krzysztof, Jebbink Maarten F., Petersen Gudula, Forster Johannes, Berkhout Ben, Uberla Klaus Human coronavirus NL63 infection is associated with croup Advances in experimental medicine and biology 2006;581:485-491 [PubMed]
  • van der Hoek L., Sure K., Ihorst G., Stang A., Pyrc K., Jebbink M. F., Petersen G., Forster J., Berkhout B., Überla K. Human coronavirus NL63 infection is associated with groupin: S. Perlman, K. V. Holmes, editors. The Nidoviruses: toward control of SARS and other nidovirus diseases. S.l.: Springer; 2006. p. 485-491, ISBN 9780387262024
  • Schildgen Oliver, Jebbink Maarten F., de Vries Michel, Pyrc Krzysztov, Dijkman Ronald, Simon Arne, Müller Andreas, Kupfer Bernd, van der Hoek Lia Identification of cell lines permissive for human coronavirus NL63 Journal of virological methods 2006;138 (1-2):207-210 [PubMed]
  • Pyrc Krzysztof, Bosch Berend Jan, Berkhout Ben, Jebbink Maarten F., Dijkman Ronald, Rottier Peter, van der Hoek Lia Inhibition of human coronavirus NL63 infection at early stages of the replication cycle Antimicrobial agents and chemotherapy 2006;50 (6):2000-2008 [PubMed]
  • Pyrc Krzysztof, Dijkman Ronald, Deng Lea, Jebbink Maarten F., Ross Howard A., Berkhout Ben, van der Hoek Lia Mosaic structure of human coronavirus NL63, one thousand years of evolution Journal of molecular biology 2006;364 (5):964-973 [PubMed]

2005

  • van der Hoek Lia, Sure Klaus, Ihorst Gabriele, Stang Alexander, Pyrc Krzysztof, Jebbink Maarten F., Petersen Gudula, Forster Johannes, Berkhout Ben, Uberla Klaus Croup is associated with the novel coronavirus NL63 PLoS medicine 2005;2 (8):764 e240-770 [PubMed]
  • van der Hoek Lia, Back Nicole, Jebbink Maarten F., de Ronde Anthony, Bakker Margreet, Jurriaans Suzanne, Reiss Peter, Parkin Neil, Berkhout Ben Increased multinucleoside drug resistance and decreased replicative capacity of a human immunodeficiency virus type 1 variant with an 8-amino-acid insert in the reverse transcriptase Journal of virology 2005;79 (6):3536-3543 [PubMed]

2004

  • Pyrc Krzysztof, Jebbink Maarten F., Berkhout Ben, van der Hoek Lia Genome structure and transcriptional regulation of human coronavirus NL63 Virology journal 2004;1 (1):7 [PubMed]
  • van der Hoek Lia, Pyrc Krzysztof, Jebbink Maarten F., Vermeulen-Oost Wilma, Berkhout Ron J. M., Wolthers Katja C., Wertheim-van Dillen Pauline M. E., Kaandorp Jos, Spaargaren Joke, Berkhout Ben Identification of a new human coronavirus Nature medicine 2004;10 (4):368-373 [PubMed]

2001

  • Lukashov V. V., Huismans R., Jebbink M. F., Danner S. A., de Boer R. J., Goudsmit J. Selection by AZT and rapid replacement in the absence of drugs of HIV type 1 resistant to multiple nucleoside analogs AIDS research and human retroviruses 2001;17 (9):807-818 [PubMed]

1999

  • Zsíros J., Jebbink M. F., Lukashov V. V., Voûte P. A., Berkhout B. Biased nucleotide composition of the genome of HERV-K related endogenous retroviruses and its evolutionary implications Journal of molecular evolution 1999;48 (1):102-111 [PubMed]

1998

  • Zsíros J., Jebbink M. F., Lukashov V. V., Voûte P. A., Berkhout B. Evolutionary relationships within a subgroup of HERV-K-related human endogenous retroviruses Journal of general virology 1998;79 ( Pt 1):61-70 [PubMed]
  • Zsíros J., Jebbink M. F., Voûte P. A., Berkhout B. Identification of novel human endogenous retroviral sequences belonging to the HERV-K family AIDS research and human retroviruses 1998;14 (12):1093-1098 [PubMed]

1995

  • Smits H. L., van Gemen B., Schukkink R., van der Velden J., Tjong-A-Hung S. P., Jebbink M. F., ter Schegget J. Application of the NASBA nucleic acid amplification method for the detection of human papillomavirus type 16 E6-E7 transcripts Journal of virological methods 1995;54 (1):75-81 [PubMed]

1994

  • Smits H. L., Traanberg K. F., Krul M. R., Prussia P. R., Kuiken C. L., Jebbink M. F., Kleyne J. A., van den Berg R. H., Capone B., de Bruyn A. Identification of a unique group of human papillomavirus type 16 sequence variants among clinical isolates from Barbados Journal of general virology 1994;75 ( Pt 9):2457-2462 [PubMed]

1993

  • Tieben L. M., ter Schegget J., Minnaar R. P., Bouwes Bavinck J. N., Berkhout R. J., Vermeer B. J., Jebbink M. F., Smits H. L. Detection of cutaneous and genital HPV types in clinical samples by PCR using consensus primers Journal of virological methods 1993;42 (2-3):265-279 [PubMed]

1992

  • Smits H. L., Tieben L. M., Tjong-A-Hung S. P., Jebbink M. F., Minnaar R. P., Jansen C. L., ter Schegget J. Detection and typing of human papillomaviruses present in fixed and stained archival cervical smears by a consensus polymerase chain reaction and direct sequence analysis allow the identification of a broad spectrum of human papillomavirus types Journal of general virology 1992;73 ( Pt 12):3263-3268 [PubMed]
  • Cornelissen M. T., Bots T., Briët M. A., Jebbink M. F., Struyk A. P., van den Tweel J. G., Greer C. E., Smits H. L., ter Schegget J. DETECTION OF HUMAN PAPILLOMAVIRUS TYPES BY THE POLYMERASE CHAIN-REACTION AND THE DIFFERENTIATION BETWEEN HIGH-RISK AND LOW-RISK CERVICAL LESIONS Virchows Archiv. B, Cell pathology including molecular pathology 1992;62 (3):167-171 [PubMed]

1991

  • Smits H. L., Cornelissen M. T., Jebbink M. F., van den Tweel J. G., Struyk A. P., Briët M., ter Schegget J. HUMAN PAPILLOMAVIRUS TYPE-16 TRANSCRIPTS EXPRESSED FROM VIRAL CELLULAR JUNCTIONS AND FULL-LENGTH VIRAL COPIES IN CASKI CELLS AND IN A CERVICAL-CARCINOMA Virology 1991;182 (2):870-873 [PubMed]

1989

  • Cornelissen M. T., van den Tweel J. G., Struyk A. P., Jebbink M. F., Briët M., van der Noordaa J., ter Schegget J. T. LOCALIZATION OF HUMAN PAPILLOMAVIRUS TYPE-16 DNA USING THE POLYMERASE CHAIN-REACTION IN THE CERVIX UTERI OF WOMEN WITH CERVICAL INTRAEPITHELIAL NEOPLASIA Journal of general virology 1989;70 (10):2555-2562 [PubMed]