A. Bongaarts MSc publications

2021

• Giannikou Krinio, Zhu Zachary, Kim Jaegil, Winden Kellen D., Tyburczy Magdalena E., Marron David, Parker Joel S., Hebert Zachary, Bongaarts Anika, Taing Len, Long Henry W., Pisano William V., Alexandrescu Sanda, Godlewski Brianna, Nellist Mark, Kotulska Katarzyna, Jozwiak Sergiusz, Roszkowski Marcin, Mandera Marek, Thiele Elizabeth A., Lidov Hart, Getz Gad, Devinsky Orrin, Lawrence Michael S., Ligon Keith L., Ellison David W., Sahin Mustafa, Aronica Eleonora, Meredith David M., Kwiatkowski David J. Subependymal giant cell astrocytomas are characterized by mTORC1 hyperactivation, a very low somatic mutation rate, and a unique gene expression profile Modern pathology 2021;34 (2):264-279 [PubMed]
• Broekaart Diede W.M., Bertran Alexandra, Jia Shaobo, Korotkov Anatoly, Senkov Oleg, Bongaarts Anika, Mills James D., Anink Jasper J., Seco Jesús, Baayen Johannes C., Idema Sander, Chabrol Elodie, Becker Albert J., Wadman Wytse J., Tarragó Teresa, Gorter Jan A., Aronica Eleonora, Prades Roger, Dityatev Alexander, van Vliet Erwin A. The matrix metalloproteinase inhibitor IPR-179 has antiseizure and antiepileptogenic effects Journal of clinical investigation 2021;131 (1) [PubMed]

2020

• Bongaarts Anika, de Jong Jody M., Broekaart Diede W. M., van Scheppingen Jackelien, Anink Jasper J., Mijnsbergen Caroline, Jansen Floor E., Spliet Wim G. M., den Dunnen Wilfred F. A., Gruber Victoria E., Scholl Theresa, Hainfellner Johannes A., Feucht Martha, Borkowska Julita, Kotulska Katarzyna, Jozwiak Sergiusz, Grajkowska Wieslawa, Buccoliero Anna Maria, Caporalini Chiara, Giordano Flavio, Genitori Lorenzo, Scicluna Brendon P., Schouten-van Meeteren Antoinette Y. N., van Vliet Erwin A., Mühlebner Angelika, Mills James D., Aronica Eleonora Dysregulation of the MMP/TIMP Proteolytic System in Subependymal Giant Cell Astrocytomas in Patients With Tuberous Sclerosis Complex: Modulation of MMP by MicroRNA-320d In Vitro Journal of neuropathology and experimental neurology 2020;79 (7):777-790 [PubMed]
• Mühlebner Angelika, van Scheppingen Jackelien, de Neef Andrew, Bongaarts Anika, Zimmer Till S., Mills James D., Jansen Floor E., Spliet Wim G. M., Krsek Pavel, Zamecnik Josef, Coras Roland, Blumcke Ingmar, Feucht Martha, Scholl Theresa, Gruber Victoria-Elisabeth, Hainfellner Johannes A., Söylemezoğlu Figen, Kotulska Katarzyna, Lagae Lieven, Jansen Anna C., Kwiatkowski David J., Jozwiak Sergiusz, Curatolo Paolo, Aronica Eleonora Myelin Pathology Beyond White Matter in Tuberous Sclerosis Complex (TSC) Cortical Tubers Journal of neuropathology and experimental neurology 2020;79 (10):1054-1064 [PubMed]

2019

• Mühlebner A., Bongaarts A., Sarnat H. B., Scholl T., Aronica E. New insights into a spectrum of developmental malformations related to mTOR dysregulations: challenges and perspectives Journal of anatomy 2019;235 (3):521-542 [PubMed]
• Bongaarts Anika, van Scheppingen Jackelien, Korotkov Anatoly, Mijnsbergen Caroline, Anink Jasper J., Jansen Floor E., Spliet Wim G. M., den Dunnen Wilfred F. A., Gruber Victoria E., Scholl Theresa, Samueli Sharon, Hainfellner Johannes A., Feucht Martha, Kotulska Katarzyna, Jozwiak Sergiusz, Grajkowska Wieslawa, Buccoliero Anna Maria, Caporalini Chiara, Giordano Flavio, Genitori Lorenzo, Coras Roland, Blümcke Ingmar, Krsek Pavel, Zamecnik Josef, Meijer Lisethe, Scicluna Brendon P., Schouten-van Meeteren Antoinette Y. N., Mühlebner Angelika, Mills James D., Aronica Eleonora The coding and non-coding transcriptional landscape of subependymal giant cell astrocytomas Brain 2019;143 (1):131-149 [PubMed]

2018

• Bongaarts Anika, Prabowo Avanita S., Arena Andrea, Anink Jasper J., Reinten Roy J., Jansen Floor E., Spliet Wim G. M., Thom Maria, Coras Roland, Blümcke Ingmar, Kotulska Katarzyna, Jozwiak Sergiusz, Grajkowska Wieslawa, Söylemezoglu Figen, Pimentel José, Meeteren Antoinette Y. N. Schouten-Van, Mills James D., Iyer Anand M., Vliet Erwin A. Van, Mühlebner Angelika, Aronica Eleonora MicroRNA519d and microRNA4758 can identify gangliogliomas from dysembryoplastic neuroepithelial tumours and astrocytomas Oncotarget 2018;9 (46):28103-28115 [PubMed]
• van Scheppingen Jackelien, Mills James D., Zimmer Till S., Broekaart Diede W. M., Iori Valentina, Bongaarts Anika, Anink Jasper J., Iyer Anand M., Korotkov Anatoly, Jansen Floor E., van Hecke Wim, Spliet Wim G., van Rijen Peter C., Baayen Johannes C., Vezzani Annamaria, van Vliet Erwin A., Aronica Eleonora miR147b: A novel key regulator of interleukin 1 beta-mediated inflammation in human astrocytes Glia 2018;66 (5):1082-1097 [PubMed]
• Thom Maria, Liu Joan, Bongaarts Anika, Reinten Roy J., Paradiso Beatrice, Jäger Hans Rolf, Reeves Cheryl, Somani Alyma, An Shu, Marsdon Derek, McEvoy Andrew, Miserocchi Anna, Thorne Lewis, Newman Fay, Bucur Sorin, Honavar Mrinalini, Jacques Tom, Aronica Eleonora MULTINODULAR AND VACUOLATING NEURONAL TUMOURS IN EPILEPSY: DYSPLASIA OR NEOPLASIA? Brain pathology (Zurich, Switzerland) 2018;28 (2):155-171 [PubMed]

2017

• Mills James D., Iyer Anand M., van Scheppingen Jackelien, Bongaarts Anika, Anink Jasper J., Janssen Bart, Zimmer Till S., Spliet Wim G., van Rijen Peter C., Jansen Floor E., Feucht Martha, Hainfellner Johannes A., Krsek Pavel, Zamecnik Josef, Kotulska Katarzyna, Jozwiak Sergiusz, Jansen Anna, Lagae Lieven, Curatolo Paolo, Kwiatkowski David J., Pasterkamp R. Jeroen, Senthilkumar Ketharini, von Oerthel Lars, Hoekman Marco F., Gorter Jan A., Crino Peter B., Mühlebner Angelika, Scicluna Brendon P., Aronica Eleonora Coding and small non-coding transcriptional landscape of tuberous sclerosis complex cortical tubers: implications for pathophysiology and treatment Scientific reports 2017;7 (1):8089 [PubMed]
• Bongaarts Anika, Giannikou Krinio, Reinten Roy J., Anink Jasper J., Mills James D., Jansen Floor E., Spliet G. M. Wim, den Dunnen Willfred F. A., Coras Roland, Blümcke Ingmar, Paulus Werner, Scholl Theresa, Feucht Martha, Kotulska Katarzyna, Jozwiak Sergiusz, Buccoliero Anna Maria, Caporalini Chiara, Giordano Flavio, Genitori Lorenzo, Söylemezoğlu Figen, Pimentel José, Nellist Mark, Schouten-van Meeteren Antoinette Y. N., Nag Anwesha, Mühlebner Angelika, Kwiatkowski David J., Aronica Eleonora Subependymal giant cell astrocytomas in Tuberous Sclerosis Complex have consistent TSC1/TSC2 biallelic inactivation, and no BRAF mutations Oncotarget 2017;8 (56):95516-95529 [PubMed]

2015

• Oldenburg Joppe, van der Krogt Gerard, Twiss Floor, Bongaarts Anika, Habani Yasmin, Slotman Johan A., Houtsmuller Adriaan, Huveneers Stephan, de Rooij Johan VASP, zyxin and TES are tension-dependent members of Focal Adherens Junctions independent of the alpha-catenin-vinculin module Scientific reports 2015;5:17225 [PubMed]