C.J. Schinkel PhD publications

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Publications PhD C.J. Schinkel

Position
Medical Specialist
Main activities
Patient care, Research, Other
Specialisation
Medical Microbiology / Clinical Virology (MD PhD)
Focus of research

Most of my research since my PhD in 2008 has focused on hepatitis C virus (HCV), which has resulted in a current productive research line, encompassing several aspects of HCV infection – from epidemiology to clinical and fundamental virological research - and which is embedded in a multidisciplinary network of institutional, national and international collaborations.

I have been involved in several phase 1 and 2 trials with protease inhibitors or other candidate drugs. These clinical trials led to several virological ancillary studies, styding HCV resistance to direct acting antivirals. 

A second research topic has been the new HCV epidemic in HIV infected MSM. Together with Prof. Dr. Prins, from the Public Health Service from Amsterdam in 2008 we successfully applied for a grant from the AIDS Fund to start the MOSAIC cohort, a multicenter cohort with the objective to study the sequellae of acute Hepatitis C virus (HCV) infection in this patient group.An interesting novel observation within this cohort was the partial immunity we observed against reinfection with the same genotype. To investigate this further we started a collaboration with Prof. Spits and Dr. Beaumont from AIMM therapeutics, with the ultimate goal of developing monoclonal antibodies against HCV (funded by the dutch government)

To obtain a more comprehensive understanding of protective immunity against HCV, transcriptomics, innate immunity and T-cell responses in the same frequently exposed non-chronic drug users from the ACS will be studied by groups we collaborate with (the group o Dr. Boonstra from the Erasmus Medical Center in Rotterdam).
Besides the topics described above I also initiated and participated studies on the molecular epidemiology of HCV. Part of this work has been done in collaboration with Prof. Pybus from Oxford University and part with Dr. T van der Laar, from the Free University of Amsterdam.

Amsterdam UMC Research Institutes
AMC departments
All publications

2021

  • Smit Colette, Boyd Anders, Rijnders Bart J. A., van de Laar Thijs J. W., Leyten Eliane M., Bierman Wouter F., Newsum Astrid M., Schinkel Janke, Prins Maria, van der Valk Marc, Reiss Peter, van der Valk M., Geerlings S. E., Goorhuis A., Hovius J. W., Nellen F. J. B., van der Poll T., Prins J. M., van Vugt M., Wiersinga W. J., Wit F. W. M. N., Jurriaans S., Back N. K. T., Zaaijer H. L., Berkhout B., Cornelissen M. T. E., Schinkel C. J., Wolthers K. C., Sigaloff K. C. E., Ang C. W., Reuwer A., Nellen J., van Nood E., Renckens R., Kok M., Hoogerwerf J., Richel O., Stelma F. F., Langebeek N., Lauw F. N., van Wijk M., Bakker M., Stienstra Y., Reiss P., Bezemer D. O., van Sighem A. I., Smit C., van de Sande L., Groters M., Schoorl M. HCV micro-elimination in individuals with HIV in the Netherlands 4 years after universal access to direct-acting antivirals: a retrospective cohort study Lancet HIV 2021;8 (2):e96-e105 [PubMed]

2020

  • Newsum A. M. Acute hepatitis C virus infection among men who have sex with men: Epidemiology, diagnosis, treatment, and outcomes 2020. 206p. ISBN 9789463613781. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Prins M.; Co-supervisors: Schinkel C. J., Matser A. A)
  • Korevaar Daniël A., Kootte Ruud S., Smits Loek P., van den Aardweg Joost G., Bonta Peter I., Schinkel Janke, Vigeveno René M., van den Berk Inge A. H., Scheerder Maeke J., Lemkes Bregtje A., Goorhuis Abraham, Beenen Ludo F. M., Annema Jouke T., Study group members AMC , Hovius Joppe W. R. Added value of chest computed tomography in suspected COVID-19: an analysis of 239 patients European respiratory journal 2020;56 (2) [PubMed]
  • Oude Munnink Bas B., Nieuwenhuijse David F., Stein Mart, O’Toole Áine, Haverkate Manon, Mollers Madelief, Kamga Sandra K., Schapendonk Claudia, Pronk Mark, Lexmond Pascal, van der Linden Anne, Bestebroer Theo, Chestakova Irina, Overmars Ronald J., van Nieuwkoop Stefan, Molenkamp Richard, van der Eijk Annemiek A., GeurtsvanKessel Corine, Vennema Harry, Meijer Adam, Rambaut Andrew, van Dissel Jaap, Sikkema Reina S., Timen Aura, Koopmans Marion, Oudehuis G. J. A. P. M., Schinkel Janke, Kluytmans Jan, Kluytmans-van den Bergh Marjolein, van den Bijllaardt Wouter, Berntvelsen Robbert G., van Rijen Miranda M. L., Schneeberger Peter, Pas Suzan, Diederen Bram M., Bergmans Anneke M. C., van der Eijk P. A. Verspui, Verweij Jaco J., Buiting Anton G. N., Streefkerk Roel, Aldenkamp A. P., de Man P., Koelemal J. G. M., Ong D., Paltansing S., Veassen N., Sleven Jacqueline, Bakker Leendert, Brockhoff Heinrich, van Tienen Carla Author Correction: Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands (Nature Medicine, (2020), 26, 9, (1405-1410), 10.1038/s41591-020-0997-y) Nature medicine 2020;26 (11):1802 [PubMed]
  • Prinsenberg Tamara, Zantkuijl Paul, Zuilhof Wim, Davidovich Udi, Schinkel Janke, Prins Maria, van der Valk Marc Design and implementation of a multilevel intervention to reduce hepatitis c transmission among men who have sex with men in Amsterdam: Co-creation and usability study JMIR Formative Research 2020;4 (9) [PubMed]
  • Prinsenberg Tamara, Rebers Sjoerd, Boyd Anders, Zuure Freke, Prins Maria, van der Valk Marc, Schinkel Janke Dried blood spot self-sampling at home is a feasible technique for hepatitis C RNA detection PLoS ONE 2020;15 (4) [PubMed]
  • Merat Sabrina J., Bru Camille, van de Berg Dorien, Molenkamp Richard, Tarr Alexander W., Koekkoek Sylvie, Kootstra Neeltje A., Prins Maria, Ball Jonathan K., Bakker Arjen Q., de Jong Menno D., Spits Hergen, Beaumont Tim, Schinkel Janke Erratum to: ‘Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance’ (J Hepatol 2019; 71(1): 14-24) (Journal of Hepatology (2019) 71(1) (14–24), (S016882781930128X), (10.1016/j.jhep.2019.02.013)) Journal of hepatology 2020;73 (4):999-1000 [PubMed]
  • Oude Munnink Bas B., Nieuwenhuijse David F., Stein Mart, O’Toole Áine, Haverkate Manon, Mollers Madelief, Kamga Sandra K., Schapendonk Claudia, Pronk Mark, Lexmond Pascal, van der Linden Anne, Bestebroer Theo, Chestakova Irina, Overmars Ronald J., van Nieuwkoop Stefan, Molenkamp Richard, van der Eijk Annemiek A., GeurtsvanKessel Corine, Vennema Harry, Meijer Adam, Rambaut Andrew, van Dissel Jaap, Sikkema Reina S., Timen Aura, Koopmans Marion, Oudehuis G. J. A. P. M., Schinkel Janke, Kluytmans Jan, Kluytmans-van den Bergh Marjolein, van den Bijllaardt Wouter, Berntvelsen Robbert G., van Rijen Miranda M. L., Schneeberger Peter, Pas Suzan, Diederen Bram M., Bergmans Anneke M. C., van der Eijk P. A. Verspui, Verweij Jaco, Buiting Anton G. N., Streefkerk Roel, Aldenkamp A. P., de Man P., Koelemal J. G. M., Ong D., Paltansing S., Veassen N., Sleven Jacqueline, Bakker Leendert, Brockhoff Heinrich, van Tienen Carla Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands Nature medicine 2020;26 (9):1405-1410 [PubMed]

2019

  • Boerekamps Anne, Vanwolleghem Thomas, van der Valk Marc, van den Berk Guido E., van Kasteren Marjo, Posthouwer Dirk, Dofferhoff Anthonius S. M., van Hoek Bart, Ramsoekh Dewkoemar, Koopsen Jelle, Schinkel Janke, Florence Eric, Arends Joop E., Rijnders Bart J. 8 weeks of sofosbuvir/ledipasvir is effective in DAA-naive non-cirrhotic HCV genotype 4 infected patients (HEPNED-001 study) Journal of hepatology 2019;70 (3):554-557 [PubMed]
  • Steba Gaby S., Koekkoek Sylvie M., Prins Maria, Brinkman Kees, Kwa David, van der Meer Jan T. M., van der Valk Marc, Molenkamp Richard, Pollakis Georgios, Schinkel Janke, Paxton William A. Bile-salt stimulated lipase polymorphisms do not associate with HCV susceptibility Virus research 2019;274 [PubMed]
  • Merat Sabrina J., Bru Camille, van de Berg Dorien, Molenkamp Richard, Tarr Alexander W., Koekkoek Sylvie, Kootstra Neeltje A., Prins Maria, Ball Jonathan K., Bakker Arjen Q., de Jong Menno D., Spits Hergen, Beaumont Tim, Schinkel Janke Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance Journal of hepatology 2019;71 (1):14-24 [PubMed]
  • Garcia Garrido Hannah M, van Aalst Mariëlle, Schinkel Janke, Koen Gerrit, Defoer Jacqueline M, Hazenberg Mette D, Nur Erfan, Grobusch Martin P, Zeerleder Sascha S, Goorhuis Abraham, de Bree Godelieve J Early loss of immunity against measles following allogeneic hematopoietic stem cell transplantation American journal of hematology 2019;94 (10):E270-E272 [PubMed]
  • Abayasingam Arunasingam, Leung Preston, Eltahla Auda, Bull Rowena A., Luciani Fabio, Grebely Jason, Dore Gregory J., Applegate Tanya, Page Kimberly, Bruneau Julie, Cox Andrea L., Kim Arthur Y., Schinkel Janke, Shoukry Naglaa H., Lauer Georg M., Maher Lisa, Hellard Margaret, Prins Maria, Lloyd Andrew, Rodrigo Chaturaka Genomic characterization of hepatitis C virus transmitted founder variants with deep sequencing Infection, genetics and evolution 2019;71:36-41 [PubMed]
  • Rodrigo Chaturaka, Leung Preston, Lloyd Andrew R., Bull Rowena A., Luciani Fabio, Grebely Jason, Dore Gregory J., Applegate Tanya, Page Kimberly, Bruneau Julie, Cox Andrea L., Osburn William, Kim Arthur Y., Shoukry Naglaa H., Lauer Georg M., Maher Lisa, Schinkel Janke, Prins Maria, Hellard Margaret, Eltahla Auda A. Genomic variability of within-host hepatitis C variants in acute infection Journal of viral hepatitis 2019;26 (4):476-484 [PubMed]
  • Raghwani Jayna, Wu Chieh-Hsi, Ho Cynthia K. Y., de Jong Menno, Molenkamp Richard, Schinkel Janke, Pybus Oliver G., Lythgoe Katrina A. High-resolution evolutionary analysis of within-host hepatitis C virus infection Journal of infectious diseases 2019;219 (11):1722-1729 [PubMed]
  • Nijmeijer Bernadien M, Sarrami-Forooshani Ramin, Steba Gaby S, Schreurs Renée Rce, Koekkoek Sylvie M, Molenkamp Richard, Schinkel Janke, Reiss Peter, Siegenbeek van Heukelom Matthijs L, van der Valk Marc, Ribeiro Carla Ms, Geijtenbeek Teunis Bh HIV-1 exposure and immune activation enhance sexual transmission of Hepatitis C virus by primary Langerhans cells Journal of the International AIDS Society 2019;22 (3):e25268 [PubMed]
  • Overbosch Femke W., Elfrink Floor, Schinkel Janke, Sonder Gerard J. B. No chikungunya virus infections among Dutch long-term travellers to (sub)tropical countries: A prospective study 2008-2011 BMC infectious diseases 2019;19 (1) [PubMed]
  • Merat Sabrina Protective antibody responses against HCV E1E2 in high-risk populations 2019. 194p. ISBN 9789463238083. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Spits H. , de Jong M. D.; Co-supervisors: Schinkel C. J., Beaumont T.)
  • van Dijk M., Kracht P. A. M., Arends J. E., Blokzijl H., Burger D. M., van Erpecum K. J., van Hoek B., de Knegt R. J., Posthouwer D., Ramsoekh D., Rijnders B. J. A., Schinkel J., Willemse S. B., van der Valk M., Drenth J. P. H. Retrieval of chronic hepatitis C patients. A manifesto for action to eliminate hepatitis C in the Netherlands: The CELINE project Netherlands journal of medicine 2019;77 (4):131-138
  • Nijmeijer Bernadien M., Koopsen Jelle, Schinkel Janke, Prins Maria, Geijtenbeek Teunis B. H. Sexually transmitted hepatitis C virus infections: current trends, and recent advances in understanding the spread in men who have sex with men Journal of the International AIDS Society 2019;22 (S6) [PubMed]
  • Steba Gaby S., Koekkoek Sylvie M., Tanck Michael W. T., Vanhommerig Joost W., van der Meer Jan T. M., Kwa David, Brinkman Kees, Prins Maria, Berkhout Ben, Pollakis Georgios, Molenkamp Richard, Schinkel Janke, Paxton William A. SNP rs688 within the low-density lipoprotein receptor (LDL-R) gene associates with HCV susceptibility Liver international 2019;39 (3):463-469 [PubMed]
  • Boerekamps Anne, de Weggheleire Anja, van den Berk Guido E., Lauw Fanny N., Claassen Mark A. A., Posthouwer Dirk, Bierman Wouter F., Hullegie Sebastiaan J., Popping Stephanie, van de Vijver David A. C. M., Dofferhoff Anthonius S. M., Kootstra Gert Jan, Leyten Eliane M., den Hollander Jan, van Kasteren Marjo E., Soetekouw Robert, Ammerlaan Heidi S. M., Schinkel Janke, Florence Eric, Arends Joop E., Rijnders Bart J. A. Treatment of acute hepatitis C genotypes 1 and 4 with 8 weeks of grazoprevir plus elbasvir (DAHHS2): an open-label, multicentre, single-arm, phase 3b trial lancet. Gastroenterology & hepatology 2019;4 (4):269-277

2018

  • Steba Gaby S., Koekkoek Sylvie M., Vanhommerig Joost W., Brinkman Kees, Kwa David, van der Meer Jan T. M., Prins Maria, Berkhout Ben, Tanck Michael, Paxton William A., Molenkamp Richard, Schinkel Janke DC-SIGN Polymorphisms Associate with Risk of Hepatitis C Virus Infection Among Men who Have Sex with Men but not Among Injecting Drug Users Journal of infectious diseases 2018;217 (3):353-357 [PubMed]
  • Overbosch Femke W., Schinkel Janke, Stolte Ineke G., Prins Maria, Sonder Gerard J. B. Dengue virus infection among long-term travelers from the Netherlands: A prospective study, 2008-2011 PLoS ONE 2018;13 (2):e0192193 [PubMed]
  • Hatleberg Camilla I., Ryom Lene, el-Sadr Wafaa, Mocroft Amanda, Reiss Peter, de Wit Stephane, Dabis Francois, Pradier Christian, D’Arminio Monforte Antonella, Kovari Helen, Law Matthew, Lundgren Jens D., Sabin Caroline A., Calvo G., Bonnet F., Kirk O., Morfeldt L., Weber R., Lind-Thomsen A., Salbøl Brandt R., Hillebreght M., Zaheri S., Wit Fwnm, Scherrer A., Schöni-Affolter F., Rickenbach M., Tavelli A., Fanti I., Leleux O., Mourali J., le Marec F., Boerg E., Thulin E., Sundström A., Bartsch G., Thompsen G., Necsoi C., Delforge M., Prins J. M., Kuijpers T. W., Scherpbier H. J., Godfried M. H., Geerlings S. E., Bos J. C., Wiersinga W. J., Hovius J. W., Zaaijer H. L., Schinkel C. J., Stelma F. F., Ang C. W. Gender differences in the use of cardiovascular interventions in HIV-positive persons; the D:A:D study Journal of the International AIDS Society 2018;21 (3) [PubMed]
  • Elfrink Floortje, Overbosch Femke W., Schinkel Janke, Koen Gerrit, Sonder Gerard J. B. Hepatitis E in long-term travelers from the Netherlands to subtropical and tropical countries, 2008–2011 Emerging infectious diseases 2018;24 (6):1055-1060 [PubMed]
  • Smolders E. J., Smit C., de Kanter C. T. M. M., Dofferhoff A. S. M., Arends J. E., Brinkman K., Rijnders B., van der Valk M., Reiss P., Burger D. M., Prins J. M., Kuijpers T. W., Scherpbier H. J., van der Meer J. T. M., Wit F. W. M. N., Godfried M. H., van der Poll T., Nellen F. J. B., Geerlings S. E., van Vugt M., Pajkrt D., Wiersinga W. J., Goorhuis A., Hovius J. W., Bijsterveld M. A. H., van Eden J., van Hes A. M. H., Mutschelknauss M., Nobel H. E., Pijnappel F. J. J., Weijsenfeld A. M., Jurriaans S., Back N. K. T., Zaaijer H. L., Berkhout B., Cornelissen M. T. E., Schinkel C. J., Thomas X. V., van den Berge M., Stegeman A., Baas S., Hage de Looff L., Wintermans B., Veenemans J., Pronk M. J. H., Ammerlaan H. S. M., de Munnik E. S., Langebeek N., van Wijk M., Vandenbroucke-Grauls C. M. J. E. Management of drug interactions with direct-acting antivirals in Dutch HIV/hepatitis C virus-coinfected patients: adequate but not perfect HIV medicine 2018;19 (3):216-226 [PubMed]
  • Merat Sabrina J., van de Berg Dorien, Bru Camille, Yasuda Etsuko, Breij Esther, Kootstra Neeltje, Prins Maria, Molenkamp Richard, Bakker Arjen Q., de Jong Menno D., Spits Hergen, Schinkel Janke, Beaumont Tim Multiplex flow cytometry-based assay to study the breadth of antibody responses against E1E2 glycoproteins of hepatitis C virus Journal of immunological methods 2018;454:15-26 [PubMed]
  • Newsum Astrid M., Molenkamp Richard, van der Meer Jan T., Rebers Sjoerd P., Prins Maria, van der Valk Marc, Schinkel Janke Persistence of NS5B-S282T, a sofosbuvir resistance-associated substitution, in a HIV/HCV-coinfected MSM with risk of onward transmission Journal of hepatology 2018;69 (4):968-970 [PubMed]
  • Ho Cynthia K. Y. The phylodynamics of hepatitis C virus in a clinical and public health context 2018. ISBN 9788395163104. [UvA Dissertations Online] University of Amsterdam. (Supervisor: de Jong M. D.; Co-supervisors: Schinkel C. J., Molenkamp R.)

2017

  • Eltahla A. A., Rodrigo C., Betz-Stablein B., Grebely J., Applegate T., Luciani F., Schinkel J., Dore G. J., Page K., Bruneau J., Morris M. D., Cox A. L., Kim A. Y., Shoukry N. H., Lauer G. M., Maher L., Hellard M., Prins M. [= Maria], Lloyd A. R., Bull R. A. Analysis of resistance-associated substitutions in acute hepatitis C virus infection by deep sequencing across six genotypes and three continents Journal of viral hepatitis 2017;24 (1):37-42 [PubMed]
  • Ho Cynthia K. Y., Raghwani Jayna, Koekkoek Sylvie, Liang Richard H., van der Meer Jan T. M., van der Valk Marc, de Jong Menno, Pybus Oliver G., Schinkel Janke, Molenkamp Richard Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing Journal of virology 2017;91 (6) [PubMed]
  • Newsum Astrid M., Stolte Ineke G., van der Meer Jan T. M., Schinkel Janke, van der Valk Marc, Vanhommerig Joost W., Buvé Anne, Danta Mark, Hogewoning Arjan, Prins Maria Development and validation of the HCV-MOSAIC risk score to assist testing for acute hepatitis C virus (HCV) infection in HIV-infected men who have sex with men (MSM) Euro surveillance 2017;22 (21):30540 [PubMed]
  • Rodrigo Chaturaka, Walker Melanie R., Leung Preston, Eltahla Auda A., Grebely Jason, Dore Gregory J., Applegate Tanya, Page Kimberly, Dwivedi Sunita, Bruneau Julie, Morris Meghan D., Cox Andrea L., Osburn William, Kim Arthur Y., Schinkel Janke, Shoukry Naglaa H., Lauer Georg M., Maher Lisa, Hellard Margaret, Prins Maria, Luciani Fabio, Lloyd Andrew R., Bull Rowena A. Limited naturally occurring escape in broadly neutralizing antibody epitopes in hepatitis C glycoprotein E2 and constrained sequence usage in acute infection Infection, genetics and evolution 2017;49:88-96 [PubMed]
  • Vanhommerig Joost W., Bezemer Daniela, Molenkamp Richard, van Sighem Ard I., Smit Colette, Arends Joop E., Lauw Fanny N., Brinkman Kees, Rijnders Bart J., Newsum Astrid M., Bruisten Sylvia M., Prins Maria, van der Meer Jan T., van de Laar Thijs J., Schinkel Janke Limited overlap between phylogenetic HIV and hepatitis C virus clusters illustrates the dynamic sexual network structure of Dutch HIV-infected MSM AIDS (London, England) 2017;31 (15):2147-2158 [PubMed]
  • Hoornenborg Elske, Achterbergh Roel C. A., Schim van der Loeff Maarten F., Davidovich Udi, Hogewoning Arjan, de Vries Henry J. C., Schinkel Janke, Prins Maria, van de Laar Thijs J. W. MSM starting preexposure prophylaxis are at risk of hepatitis C virus infection AIDS (London, England) 2017;31 (11):1603-1610 [PubMed]
  • de Groen R. A., Groothuismink Z. M. A., van Oord G., Kootstra N. A., Janssen H. L. A., Prins M. [= Maria], Schinkel J., Boonstra A. NK cells in self-limited HCV infection exhibit a more extensively differentiated, but not memory-like, repertoire Journal of viral hepatitis 2017;24 (11):917-926 [PubMed]
  • Rodrigo C., Eltahla A. A., Bull R. A., Luciani F., Grebely J., Dore G. J., Applegate T., Page K., Bruneau J., Morris M. D., Cox A. L., Osburn W., Kim A. Y., Shoukry N. H., Lauer G. M., Maher L., Schinkel J., Prins M. [= Maria], Hellard M., Lloyd A. R. Phylogenetic analysis of full-length, early infection, hepatitis C virus genomes among people with intravenous drug use: the InC(3) Study Journal of viral hepatitis 2017;24 (1):43-52 [PubMed]
  • van der Ree Meike H., de Vree J. Marleen, Stelma Femke, Willemse Sophie, van der Valk Marc, Rietdijk Svend, Molenkamp Richard, Schinkel Janke, van Nuenen Ad C., Beuers Ulrich, Hadi Salah, Harbers Marten, van der Veer Eva, Liu Kai, Grundy John, Patick Amy K., Pavlicek Adam, Blem Jacqueline, Huang Michael, Grint Paul, Neben Steven, Gibson Neil W., Kootstra Neeltje A., Reesink Hendrik W. Safety, tolerability, and antiviral effect of RG-101 in patients with chronic hepatitis C: a phase 1B, double-blind, randomised controlled trial Lancet 2017;389 (10070):709-717 [PubMed]
  • van der Valk Marc, Zaaijer Hans L., Kater Arnon P., Schinkel Janke Sofosbuvir shows antiviral activity in a patient with chronic hepatitis E virus infection Journal of hepatology 2017;66 (1):242-243 [PubMed]
  • Newsum Astrid M., Schinkel Janke, van de Laar Thijs J. W., van der Meer Jan T. M., Prins Maria Spontaneous Clearance of Hepatitis C Virus Infection Among Human Immunodeficiency Virus-Infected Men Who Have Sex With Men Open forum infectious diseases 2017;4 (2):ofx090 [PubMed]
  • Newsum Astrid M., Ho Cynthia K. Y., Lieveld Faydra I., van de Laar Thijs J. W., Koekkoek Sylvie M., Rebers Sjoerd P., van der Meer Jan T. M., Wensing Anne M. J., Boland Greet J., Arends Joop E., van Erpecum Karel J., Prins Maria, Molenkamp Richard, Schinkel Janke The hepatitis C virus nonstructural protein 3 Q80K polymorphism is frequently detected and transmitted among HIV-infected MSM in the Netherlands AIDS (London, England) 2017;31 (1):105-112 [PubMed]

2016

  • Bull Rowena A., Eltahla Auda A., Rodrigo Chaturaka, Koekkoek Sylvie M., Walker Melanie, Pirozyan Mehdi R., Betz-Stablein Brigid, Toepfer Armin, Laird Melissa, Oh Steve, Heiner Cheryl, Maher Lisa, Schinkel Janke, Lloyd Andrew R., Luciani Fabio A method for near full-length amplification and sequencing for six hepatitis C virus genotypes BMC genomics 2016;17 (1):247 [PubMed]
  • van der Linden L., Bruning A. H. L., Thomas X. V., Minnaar R. P., Rebers S. P. H., Schinkel J., de Jong M. D., Pajkrt D., Wolthers K. C. A molecular epidemiological perspective of rhinovirus types circulating in Amsterdam from 2007 to 2012 Clinical microbiology and infection 2016;22 (12):1002.e9-1002.e14 [PubMed]
  • Corman Victor M., Rasche Andrea, Baronti Cecile, Aldabbagh Souhaib, Cadar Daniel, Reusken Chantal Bem, Pas Suzan D., Goorhuis Abraham, Schinkel Janke, Molenkamp Richard, Kümmerer Beate M., Bleicker Tobias, Brünink Sebastian, Eschbach-Bludau Monika, Eis-Hübinger Anna M., Koopmans Marion P., Schmidt-Chanasit Jonas, Grobusch Martin P., de Lamballerie Xavier, Drosten Christian, Drexler Jan Felix Assay optimization for molecular detection of Zika virus Bulletin of the World Health Organization 2016;94 (12):880-892 [PubMed]
  • Mocroft Amanda, Lundgren Jens D., Ross Michael, Fux Christoph A., Reiss Peter, Moranne Olivier, Morlat Philippe, Monforte Antonella d'Arminio, Kirk Ole, Ryom Lene, Steering D., Powderly B., Shortman N., Moecklinghoff C., Reilly G., Franquet X., Ryom L., Hatleberg C. I., Sabin C. A., Kamara D., Smith C., Phillips A., Mocroft A., Bojesen A., Grevsen A. L., Prins J. M., Kuijpers T. W., Scherpbier H. J., van der Meer J. T. M., Wit F. W. M. N., Godfried M. H., van der Poll T., Nellen F. J. B., Geerlings S. E., van Vugt M., Pajkrt D., Bos J. C., Wiersinga W. J., van der Valk M., Goorhuis A., Hovius J. W., Jurriaans S., Back N. K. T., Zaaijer H. L., Berkhout B., Cornelissen M. T. E., Schinkel C. J., Stelma F. F., Langebeek N., Vandenbroucke-Grauls C. M. J. E. Cumulative and current exposure to potentially nephrotoxic antiretrovirals and development of chronic kidney disease in HIV-positive individuals with a normal baseline estimated glomerular filtration rate: a prospective international cohort study Lancet HIV 2016;3 (1):e23-e32 [PubMed]
  • Vanhommerig Joost W. Epidemiology and diagnosis of acute hepatitis C virus infection 2016. 218p. ISBN 9789491602429. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Prins M. [= Maria]; Co-supervisors: Schinkel C. J., Bruisten S. M.)
  • Op de Coul Eline L. M., van Sighem Ard, Brinkman Kees, van Benthem Birgit H., van der Ende Marchina E., Geerlings Suzanne, Reiss Peter, Prins J. M., Kuijpers T. W., Scherpbier H. J., van der Meer J. T. M., Wit F. W. M. N., Godfried M. H., van der Poll T., Nellen F. J. B., van Vugt M., Pajkrt D., Bos J. C., Wiersinga W. J., van der Valk M., Goorhuis A., Hovius J. W., van Eden J., Henderiks A., van Hes A. M. H., Mutschelknauss M., Nobel H. E., Pijnappel F. J. J., Westerman A. M., Jurriaans S., Back N. K. T., Zaaijer H. L., Berkhout B., Cornelissen M. T. E., Schinkel C. J., Thomas X. V., van den Berge M., Stegeman A., Baas S., Hage de Looff L., Versteeg D., Pronk M. J. H., Ammerlaan H. S. M., Korsten-Vorstermans E. M. H. M., de Munnik E. S., Jansz A. R., Tjhie J., Stelma F. F., Langebeek N., Vandenbroucke-Grauls C. M. J. E. Factors associated with presenting late or with advanced HIV disease in the Netherlands, 1996-2014: results from a national observational cohort BMJ open 2016;6 (1):e009688 [PubMed]
  • Merat Sabrina J., Molenkamp Richard, Wagner Koen, Koekkoek Sylvie M., van de Berg Dorien, Yasuda Etsuko, Böhne Martino, Claassen Yvonne B., Grady Bart P., Prins Maria, Bakker Arjen Q., de Jong Menno D., Spits Hergen, Schinkel Janke, Beaumont Tim Hepatitis C virus Broadly Neutralizing Monoclonal Antibodies Isolated 25 Years after Spontaneous Clearance PLoS ONE 2016;11 (10):e0165047 [PubMed]
  • Tholen Aletta T. R., Schinkel Janke, Molenkamp Richard, Ang C. Wim Hepatitis E virus as a Cause of Acute Hepatitis in The Netherlands PLoS ONE 2016;11 (2):e0146906 [PubMed]
  • Rodrigo Chaturaka, Eltahla Auda A., Bull Rowena A., Grebely Jason, Dore Gregory J., Applegate Tanya, Page Kimberly, Bruneau Julie, Morris Meghan D., Cox Andrea L., Osburn William, Kim Arthur Y., Schinkel Janke, Shoukry Naglaa H., Lauer Georg M., Maher Lisa, Hellard Margaret, Prins Maria, Estes Chris, Razavi Homie, Lloyd Andrew R., Luciani Fabio Historical Trends in the Hepatitis C Virus Epidemics in North America and Australia Journal of infectious diseases 2016;214 (9):1383-1389 [PubMed]
  • Lieveld Faydra I., Swaans Niels, Newsum Astrid M., Ho Cynthia K. Y., Schinkel Janke, Molenkamp Richard, van der Meer Jan T. M., Arends Joop E., Hoepelman Andy I. M., Wensing Anne M. J., Siersema Peter D., van Erpecum Karel J., Boland Greet J. Resistance-associated polymorphisms in Dutch hepatitis C genotype 1a patients with and without HIV infection Annals of hepatology 2016;15 (5):696-704 [PubMed]
  • Steinhagen Katja, Probst Christian, Radzimski Christiane, Schmidt-Chanasit Jonas, Emmerich Petra, van Esbroeck Marjan, Schinkel Janke, Grobusch Martin P., Goorhuis Abraham, Warnecke Jens M., Lattwein Erik, Komorowski Lars, Deerberg Andrea, Saschenbrecker Sandra, Stöcker Winfried, Schlumberger Wolfgang Serodiagnosis of Zika virus (ZIKV) infections by a novel NS1-based ELISA devoid of cross-reactivity with dengue virus antibodies: a multicohort study of assay performance, 2015 to 2016 Euro surveillance 2016;21 (50):13 30426-28 [PubMed]
  • Willemse S. B., Baak L. C., Kuiken S. D., van der Sluys Veer A., Lettinga K. D., van der Meer J. T. M., Depla A. C. T. M., Tuynman H., van Nieuwkerk C. M. J., Schinkel C. J., Kwa D., Reesink H. W., van der Valk M. Sofosbuvir plus simeprevir for the treatment of HCV genotype 4 patients with advanced fibrosis or compensated cirrhosis is highly efficacious in real life Journal of viral hepatitis 2016;23 (12):950-954 [PubMed]
  • Karimi Ouafae, Goorhuis Abraham, Schinkel Janke, Codrington John, Vreden Stephen Gerold S., Vermaat Joost S., Stijnis Cornelis, Grobusch Martin Peter Thrombocytopenia and subcutaneous bleedings in a patient with Zika virus infection Lancet 2016;387 (10022):939-940 [PubMed]
  • Grobusch Martin Peter, Karimi Ouafae, Schinkel Janke, Codrington John, Vreden Stephen Gerold S., Vermaat Joost S., Stijnis Cornelis, Goorhuis Abraham Uncommon presentation of Zika fever or co-infection? - Authors' reply Lancet 2016;387 (10030):1813-1814 [PubMed]

2015

  • Ho Cynthia K. Y., Welkers Matthijs R. A., Thomas Xiomara V., Sullivan James C., Kieffer Tara L., Reesink Henk W., Rebers Sjoerd P. H., de Jong Menno D., Schinkel Janke, Molenkamp Richard A comparison of 454 sequencing and clonal sequencing for the characterization of hepatitis C virus NS3 variants Journal of virological methods 2015;219:28-37 [PubMed]
  • Spelman T., Morris M. D., Zang G., Rice T., Page K., Maher L., Lloyd A., Grebely J., Dore G. J., Kim A. Y., Shoukry N. H., Hellard M., Bruneau J., Cox Andrea L., Lauer Georg, McGovern Barbara H., Prins Maria, Hahn Judy, Shiboski Stephen, Mirzazadeh Ali, Alavi Maryam, Bouchard Rachel, Evans Jennifer, Grady Bart, Aneja Jasneet, Sacks-Davis Rachel, Teutsch Suzy, White Bethany, Wells Brittany, Applegate Tanya, Matthews Gail, Yeung Barbara, Schinkel Janke, Prince Leslie Erin, Roy Elise, Bates Anna, Enriquez Jarliene, Chow Sammy, McCredie Luke, Aitken Campbell, Doyle Joseph A longitudinal study of hepatitis C virus testing and infection status notification on behaviour change in people who inject drugs Journal of epidemiology and community health 2015;69 (8):745-752 [PubMed]
  • Grady B. P. X., Prins M. [= Maria], Rebers S., Molenkamp R., Geskus R. B., Schinkel J. BMI, male sex and IL28B genotype associated with persistently high hepatitis C virus RNA levels among chronically infected drug users up to 23 years following seroconversion Journal of viral hepatitis 2015;22 (3):263-271 [PubMed]
  • Gras Luuk, de Wolf Frank, Smit Colette, Prins Maria, van der Meer Jan T. M., Vanhommerig Joost W., Zwinderman Aeilko H., Schinkel Janke, Geskus Ronald B., Kuijpers T. W., Scherpbier H. J., Godfried M. H., Reiss P., van der Poll T., Nellen F. J. B., Lange J. M. A., Geerlings S. E., van Vugt M., Pajkrt D., Bos J. C., van der Valk M., Wiersinga W. J., Goorhuis A., Hovius J. W. R., Lowe S., Oude Lashof A., Posthouwer D., Pronk M. J. H., Ammerlaan H. S. M., van der Ende M. E., de Vries-Sluijs T. E. M. S., Schurink C. A. M., Nouwen J. L., Verbon A., Rijnders B. J. A., van Gorp E. C. M., van der Feltz M., Driessen G. J. A., van Rossum A. M. C., Branger J., Schippers E. F., van Nieuwkoop C., van Elzakker E. P., Groeneveld H. P., Bouwhuis J. W., Soetekouw R., ten Kate R. W., Kroon F. P., van Dissel J. T., Arend S. M. Changes in HIV RNA and CD4 cell count after acute HCV infection in chronically HIV-infected individuals JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES 2015;68 (5):536-542 [PubMed]
  • Mocroft Amanda, Lundgren Jens D., Ross Michael, Law Matthew, Reiss Peter, Kirk Ole, Smith Colette, Wentworth Deborah, Neuhaus Jacqueline, Fux Christoph A., Moranne Olivier, Morlat Phillipe, Johnson Margaret A., Ryom Lene, Lundgren J. D., Powderly B., Shortman N., Moecklinghoff C., Reilly G., Franquet X., Sabin C. A., Prins J. M., Kuijpers T. W., Scherpbier H. J., van der Meer J. T. M., Wit F. W. M. N., Godfried M. H., van der Poll T., Nellen F. J. B., Geerlings S. E., van Vugt M., Pajkrt D., Bos J. C., Wiersinga W. J., van der Valk M., Goorhuis A., Hovius J. W., Jurriaans S., Back N. K. T., Zaaijer H. L., Berkhout B., Cornelissen M. T. E., Schinkel C. J., Stelma F. F., Langebeek N., Vandenbroucke-Grauls C. M. J. E., Grijsen M., Lange J., van der Horst C., Frank M. Development and validation of a risk score for chronic kidney disease in HIV infection using prospective cohort data from the D:A:D study PLoS medicine 2015;12 (3):e1001809 [PubMed]
  • Schoffelen Annelot F., Smit Colette, van Lelyveld Steven F. L., Vogt Liffert, Bauer Martijn P., Reiss Peter, Hoepelman Andy I. M., Barth Roos E., Prins J. M., Kuijpsers T. W., Scherpbier H. J., van der Meer J. T. M., Wit F. W. M. N., Godfried M. H., van der Poll T., Nellen F. J. B., Lange J. M. A., Geerlings S. E., van Vugt M., Pajkrt D., Bos J. C., Wiersinga W. J., van der Valk M., Goorhuis A., Hovius J. W., van Eden J., Henderiks A., van Hes A. M. H., Mutschelknauss M., Nobel H. E., Pijnappel F. J. J., Westerman A. M., Jurriaans S., Back N. K. T., Zaaijer H. L., Berkhout B., Cornelissen M. T. E., Schinkel C. J., Thomas X. V., van den Berge M., Stegeman A., Baas S., Sabbe L., Goudswaard J., Pronk M. J. H., Ammerlaan H. S. M., Stelma F. F., Langebeek N., Vandenbroucke-Grauls C. M. J. E., Gras L. A. J. Diminished impact of ethnicity as a risk factor for chronic kidney disease in the current HIV treatment era Journal of infectious diseases 2015;212 (2):264-274 [PubMed]
  • Bezemer Daniela, Cori Anne, Ratmann Oliver, van Sighem Ard, Hermanides Hillegonda S., Dutilh Bas E., Gras Luuk, Rodrigues Faria Nuno, van den Hengel Rob, Duits Ashley J., Reiss Peter, de Wolf Frank, Fraser Christophe, Prins J. M., Kuijpers T. W., Scherpbier H. J., van der Meer J. T. M., Wit F. W. M. N., Godfried M. H., van der Poll T., Nellen F. J. B., Geerlings S. E., van Vugt M., Pajkrt D., Bos J. C., Wiersinga W. J., van der Valk M., Goorhuis A., Hovius J. W., van Eden J., Henderiks A., van Hes A. M. H., Mutschelknauss M., Nobel H. E., Pijnappel F. J. J., Westerman A. M., Jurriaans S., Back N. K. T., Zaaijer H. L., Berkhout B., Cornelissen M. T. E., Schinkel C. J., Thomas X. V., van den Berge M., Stegeman A., Baas S., de Looff L. Hage, Stelma F. F., Langebeek N., Vandenbroucke-Grauls C. M. J. E. Dispersion of the HIV-1 Epidemic in Men Who Have Sex with Men in the Netherlands: A Combined Mathematical Model and Phylogenetic Analysis PLoS medicine 2015;12 (11):e1001898; discussion e1001898 [PubMed]
  • Thomas Xiomara Varissa Epidemiological, immunological and virological aspects of acute and chronic hepatitis C virus infections 2015. 190p. ISBN 9789491602337. [UvA Dissertations Online] University of Amsterdam. (Supervisor: de Jong M. D.; Co-supervisors: Schinkel C. J., Molenkamp R.)
  • Vanhommerig Joost W., van de Laar Thijs J. W., Koot Maarten, van Rooijen Martijn S., Schinkel Janke, Speksnijder Arjen G. C. L., Prins Maria, de Vries Henry J., Bruisten Sylvia M. Evaluation of a hepatitis C virus (HCV) antigen assay for routine HCV screening among men who have sex with men infected with HIV Journal of virological methods 2015;213:147-150 [PubMed]
  • Hajarizadeh B., Grady B., Page K., Kim A. Y., McGovern B. H., Cox A. L., Rice T. M., Sacks-Davis R., Bruneau J., Morris M., Amin J., Schinkel J., Applegate T., Maher L., Hellard M., Lloyd A. R., Prins M. [= Maria], Geskus R. B., Dore G. J., Grebely J., Page Kimberly, Bruneau Julie, Cox Andrea L., Dore Gregory J., Grebely Jason, Hellard Margaret, Lauer Georg, Kim Arthur Y., Lloyd Andrew R., Maher Lisa, McGovern Barbara H., Shoukry Naglaa H., Morris Meghan, Hahn Judy, Shiboski Steve, Rice Thomas M., Alavi Maryam, Bouchard Rachel, Evans Jennifer, Grady Bart, Aneja Jasneet, Sacks-Davis Rachel, Teutsch Suzy, White Bethany, Wells Brittany, Zang Geng, Matthews Gail, Yeung Barbara, Prince Leslie Erin, Roy Elise Factors associated with hepatitis C virus RNA levels in early chronic infection: the InC3 study Journal of viral hepatitis 2015;22 (9):708-717 [PubMed]
  • Arends J. E., van der Meer J. T. M., Posthouwer D., Kortmann W., Brinkman K., van Assen S., Smit C., van der Valk M., van der Ende M., Schinkel J., Reiss P., Richter C., Hoepelman A. I. M. Favourable SVR12 rates with boceprevir or telaprevir triple therapy in HIV/HCV coinfected patients Netherlands journal of medicine 2015;73 (7):324-330 [PubMed]
  • Thomas Xiomara V., Grady Bart P. X., van der Meer Jan T. M., Ho Cynthia K., Vanhommerig Joost W., Rebers Sjoerd P., de Jong Menno D., van der Valk Marc, Prins Maria, Molenkamp Richard, Schinkel Janke Genetic characterization of multiple hepatitis C virus infections following acute infection in HIV-infected men who have sex with men AIDS (London, England) 2015;29 (17):2287-2295 [PubMed]
  • Sacks-Davis Rachel, Grebely Jason, Dore Gregory J., Osburn William, Cox Andrea L., Rice Thomas M., Spelman Timothy, Bruneau Julie, Prins Maria, Kim Arthur Y., McGovern Barbara H., Shoukry Naglaa H., Schinkel Janke, Allen Todd M., Morris Meghan, Hajarizadeh Behzad, Maher Lisa, Lloyd Andrew R., Page Kimberly, Hellard Margaret, Lauer Georg, Hahn Judy, Alavi Maryam, Bouchard Rachel, Evans Jennifer, Grady Bart, Aneja Jasneet, Teutsch Suzy, White Bethany, Wells Brittany, Zang Geng, Applegate Tanya, Matthews Gail, Yeung Barbara, van de Laar Thijs, Erin Prince Leslie, Roy Elise, Bates Anna, Enriquez Jarliene, Chow Sammy, Park Ju, McCredie Luke, Aitken Campbell, Bowden Scott, Higgs Peter, Tracy Lilly, Briceno Alya Hepatitis C Virus Reinfection and Spontaneous Clearance of Reinfection--the InC3 Study Journal of infectious diseases 2015;212 (9):1407-1419 [PubMed]
  • Von Eije Karin J., Schinkel Janke, van den Kerkhof J. H. C. T. Hans, Schreuder Imke, de Jong Menno D., Grobusch Martin P., Goorhuis Abraham Import van zikavirus-infectie in Nederland Nederlands tijdschrift voor geneeskunde 2015;160:D153 [PubMed]
  • Hajarizadeh Behzad, Grady Bart, Page Kimberly, Kim Arthur Y., McGovern Barbara H., Cox Andrea L., Rice Thomas M., Sacks-Davis Rachel, Bruneau Julie, Morris Meghan, Amin Janaki, Schinkel Janke, Applegate Tanya, Maher Lisa, Hellard Margaret, Lloyd Andrew R., Prins Maria, Dore Gregory J., Grebely Jason, Lauer Georg, Shoukry Naglaa H., Hahn Judy, Shiboski Steve, Alavi Maryam, Bouchard Rachel, Evans Jennifer, May Linda, Aneja Jasneet, Teutsch Suzy, White Bethany, Wells Brittany, Zang Geng, Matthews Gail, Yeung Barbara, Prince Leslie Erin, Roy Elise, Bates Anna, Enriquez Jarliene, Chow Sammy, McCredie Luke, Aitken Campbell, Doyle Joseph, Spelman Tim Patterns of hepatitis C virus RNA levels during acute infection: the InC3 study PLoS ONE 2015;10 (4):e0122232 [PubMed]
  • Vanhommerig Joost W., Lambers Femke A. E., Schinkel Janke, Geskus Ronald B., Arends Joop E., van de Laar Thijs J. W., Lauw Fanny N., Brinkman Kees, Gras Luuk, Rijnders Bart J. A., van der Meer Jan T. M., Prins Maria, Molenkamp R., Mutschelknauss M., Nobel H. E., Reesink H. W., van der Valk M., van den Berk G. E. L., Brinkman K., Kwa D., van der Meche N., Toonen A., Vos D., van Broekhuizen M., Lauw F. N., Mulder J. W., Arends J. E., van Kessel A., de Kroon I., Boonstra A., van der Ende M. E., Hullegie S., Rijnders B. J. A., van de laar T. J. W., Gras L., Smit C., van der Veldt W. Risk Factors for Sexual Transmission of Hepatitis C Virus Among Human Immunodeficiency Virus-Infected Men Who Have Sex With Men: A Case-Control Study Open forum infectious diseases 2015;2 (3):ofv115 [PubMed]
  • Vanhommerig Joost W., Schinkel Janke, van der Valk Marc Seven years of chronic hepatitis C virus infection in an HIV-infected man without detectable antibodies AIDS (London, England) 2015;29 (3):389-390 [PubMed]
  • Lamoury François M. J., Jacka Brendan, Bartlett Sofia, Bull Rowena A., Wong Arthur, Amin Janaki, Schinkel Janke, Poon Art F., Matthews Gail V., Grebely Jason, Dore Gregory J., Applegate Tanya L. The Influence of Hepatitis C Virus Genetic Region on Phylogenetic Clustering Analysis PLoS ONE 2015;10 (7):e0131437 [PubMed]

2014

  • Vanhommerig Joost W., Thomas Xiomara V., van der Meer Jan T. M., Geskus Ronald B., Bruisten Sylvia M., Molenkamp Richard, Prins Maria, Schinkel Janke, Arends J., van Baarle D., van den Berk G., Brinkman K., Coutinho R., van den Ende M., Grady B., Gras L., Ho C., Kwa D., van de Laar T., Lambers F., Mulder J., Reesink H., Smit C., van der Valk M., van der Veldt W., Karlas J., Bakker M., Visser G., Buswell C. Hepatitis C virus (HCV) antibody dynamics following acute HCV infection and reinfection among HIV-infected men who have sex with men Clinical infectious diseases 2014;59 (12):1678-1685 [PubMed]
  • Overbosch Femke W., van den Hoek Anneke, Schinkel Janke, Sonder Gerard J. B. High prevalence of previous dengue virus infection among first-generation Surinamese immigrants in the Netherlands BMC infectious diseases 2014;14:493 [PubMed]
  • Hajarizadeh Behzad, Grady Bart, Page Kimberly, Kim Arthur Y., McGovern Barbara H., Cox Andrea L., Rice Thomas M., Sacks-Davis Rachel, Bruneau Julie, Morris Meghan, Amin Janaki, Schinkel Janke, Applegate Tanya, Maher Lisa, Hellard Margaret, Lloyd Andrew R., Prins Maria, Geskus Ronald B., Dore Gregory J., Grebely Jason, Lauer Georg, Shoukry Naglaa H., Hahn Judy, Shiboski Steve, Alavi Maryam, Bouchard Rachel, Evans Jennifer, Aneja Jasneet, Teutsch Suzy, White Bethany, Wells Brittany, Zang Geng, Matthews Gail, Marks Pip, Yeung Barbara, Prince Leslie Erin, Roy Elise, Bates Anna, Enriquez Jarliene, Chow Sammy, McCredie Luke, Aitken Campbell, Doyle Joseph, Spelman Tim Interferon lambda 3 genotype predicts hepatitis C virus RNA levels in early acute infection among people who inject drugs: the InC(3) study Journal of clinical virology 2014;61 (3):430-434 [PubMed]
  • Willemse S. B., Reesink H. W., Ladee K., Karlas J., Gelderblom H. C., Molenkamp R., Schinkel J. IP-10 in chronic hepatitis C patients treated with high-dose interferon Netherlands journal of medicine 2014;72 (8):407-415 [PubMed]
  • Jansen Rogier Remco Molecular detection of respiratory pathogens: Towards clinical interpretation 2014. 197p. [UvA Dissertations Online] University of Amsterdam. (Supervisor: de Jong M. D.; Co-supervisors: Pajkrt D., Schinkel C. J., Visser C. E.)
  • Vanhommerig Joost W., Stolte Ineke G., Lambers Femke A. E., Geskus Ronald B., van de Laar Thijs J. W., Bruisten Sylvia M., Schinkel Janke, Prins Maria Stabilizing incidence of hepatitis C virus infection among men who have sex with men in Amsterdam JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES 2014;66 (5):e111-e115 [PubMed]
  • Grebely Jason, Page Kimberly, Sacks-Davis Rachel, van der Loeff Maarten Schim, Rice Thomas M., Bruneau Julie, Morris Meghan D., Hajarizadeh Behzad, Amin Janaki, Cox Andrea L., Kim Arthur Y., McGovern Barbara H., Schinkel Janke, George Jacob, Shoukry Naglaa H., Lauer Georg M., Maher Lisa, Lloyd Andrew R., Hellard Margaret, Dore Gregory J., Prins Maria, Lauer Georg, Morris Meghan, Hahn Judy, Rilla Megan, Alavi Maryam, Bouchard Rachel, Evans Jennifer, Grady Bart, Aneja Jasneet, Teutsch Suzy, White Bethany, Wells Brittany, Zang Geng, Applegate Tanya, Matthews Gail, Yeung Barbara, Prince Leslie Erin, Roy Elise, Bates Anna, Enriquez Jarliene, Chow Sammy, McCredie Luke, Aitken Campbell, Doyle Joseph, Spelman Tim The effects of female sex, viral genotype, and IL28B genotype on spontaneous clearance of acute hepatitis C virus infection Hepatology (Baltimore, Md.) 2014;59 (1):109-120 [PubMed]
  • Liang Richard H., Mo Theresa, Dong Winnie, Lee Guinevere Q., Swenson Luke C., McCloskey Rosemary M., Woods Conan K., Brumme Chanson J., Ho Cynthia K. Y., Schinkel Janke, Joy Jeffrey B., Harrigan P. Richard, Poon Art F. Y. Theoretical and experimental assessment of degenerate primer tagging in ultra-deep applications of next-generation sequencing Nucleic acids research 2014;42 (12):e98 [PubMed]
  • Urbanus Anouk T., van de Laar Thijs J. W., Geskus Ronald, Vanhommerig Joost W., van Rooijen Martijn S., Schinkel Janke, Heijman Titia, Coutinho Roel A., Prins Maria Trends in hepatitis C virus infections among MSM attending a sexually transmitted infection clinic; 1995-2010 AIDS (London, England) 2014;28 (5):781-790 [PubMed]

2013

  • de Bruijne J., Thomas X. V., Rebers S. P., Weegink C. J., Treitel M. A., Hughes E., Bergmann J. F., de Knegt R. J., Janssen H. L. A., Reesink H. W., Molenkamp R., Schinkel J. Evolutionary dynamics of hepatitis C virus NS3 protease domain during and following treatment with narlaprevir, a potent NS3 protease inhibitor Journal of viral hepatitis 2013;20 (11):779-789 [PubMed]
  • Jansen Rogier R., Biemond Bart J., Schinkel Janke, Koekkoek Sylvie M., Molenkamp Richard, de Jong Menno D., Visser Caroline E. Febrile neutropenia: significance of elaborated screening for respiratory viruses, and the comparison of different sampling methods, in neutropenic patients with hematological malignancies Virology journal 2013;10 (1):212 [PubMed]
  • Grady Bart P., Schinkel Janke, Thomas Xiomara V., Dalgard Olav Hepatitis C virus reinfection following treatment among people who use drugs Clinical infectious diseases 2013;57 (Suppl. 2):S105-S110 [PubMed]
  • Pas S., Molenkamp R., Schinkel J., Rebers S., Copra C., Seven-Deniz S., Thamke D., de Knegt R. J., Haagmans B. L., Schutten M. Performance evaluation of the new Roche cobas AmpliPrep/cobas TaqMan HCV test, version 2.0, for detection and quantification of hepatitis C virus RNA Journal of clinical microbiology 2013;51 (1):238-242 [PubMed]

2012

  • Markov Peter V., van de Laar Thijs J., Thomas Xiomara V., Aronson Sem J., Weegink Christine J., van den Berk Guido E., Prins Maria, Pybus Oliver G., Schinkel Janke Colonial History and Contemporary Transmission Shape the Genetic Diversity of Hepatitis C Virus Genotype 2 in Amsterdam Journal of virology 2012;86 (14):7677-7687 [PubMed]
  • de Bruijne Joep, Sullivan James C., Kieffer Tara L., Botfield Martyn, Shames Ben, Schinkel Janke, Molenkamp Richard, Weegink Christine, Reesink Henk Dynamic changes in HCV RNA levels and viral quasispecies in a patient with chronic hepatitis C after telaprevir-based treatment Journal of clinical virology 2012;53 (2):174-177 [PubMed]
  • Thomas Xiomara V., de Bruijne Joep, Sullivan James C., Kieffer Tara L., Ho Cynthia K. Y., Rebers Sjoerd P., de Vries Michel, Reesink Hendrik W., Weegink Christine J., Molenkamp Richard, Schinkel Janke Evaluation of Persistence of Resistant Variants with Ultra-Deep Pyrosequencing in Chronic Hepatitis C Patients Treated with Telaprevir PLoS ONE 2012;7 (7):e41191 [PubMed]
  • Grady Bart P. X., Vanhommerig Joost W., Schinkel Janke, Weegink Christine J., Bruisten Sylvia M., Lindenburg Catherina E. A., Prins Maria Low incidence of reinfection with the hepatitis C virus following treatment in active drug users in Amsterdam European journal of gastroenterology & hepatology 2012;24 (11):1302-1307 [PubMed]
  • Aronson Sem J., de Bruijne Joep, Schinkel Janke, Weegink Christine J., van der Valk Marc, Reesink Hendrik W. Nieuwe klasse medicijnen voor chronische hepatitis C Nederlands tijdschrift voor geneeskunde 2012;156 (10):A3840 [PubMed]
  • Raghwani Jayna, Thomas Xiomara V., Koekkoek Sylvie M., Schinkel Janke, Molenkamp Richard, van de Laar Thijs J., Takebe Yutaka, Tanaka Yasuhito, Mizokami Masashi, Rambaut Andrew, Pybus Oliver G. Origin and Evolution of the Unique Hepatitis C Virus Circulating Recombinant Form 2k/1b Journal of virology 2012;86 (4):2212-2220 [PubMed]
  • Hotho Daphne M., de Bruijne Joep, O'Farrell A. Marie, Boyea Teresa, Li Jianke, Bracken Michele, Li Xin, Campbell David, Guler Hans-Peter, Weegink Christine J., Schinkel Janke, Molenkamp Richard, van de Wetering de Rooij Jeroen, van Vliet Andre, Janssen Harry L. A., de Knegt Robert J., Reesink Hendrik W. Pharmacokinetics and antiviral activity of PHX1766, a novel HCV protease inhibitor, using an accelerated Phase I study design Antiviral therapy 2012;17 (2):365-375 [PubMed]

2011

  • Lambers Femke A. E., Prins Maria, Thomas Xiomara, Molenkamp Richard, Kwa David, Brinkman Kees, van der Meer Jan T. M., Schinkel Janke, Countinho R., Reesink H., van Baarle D., Smit C., Gras L., van der Veldt W. Alarming incidence of hepatitis C virus re-infection after treatment of sexually acquired acute hepatitis C virus infection in HIV-infected MSM AIDS (London, England) 2011;25 (17):F21-F27 [PubMed]
  • Hazenberg M. D., Biemond B. J., Pals S. T., Zumpolle C. M., Schinkel C. J., Linthorst G. E., Hoekstra J. B. L., Vos J. M. I. Clinical pathological conference: a non-Hodgkin's lymphoma patient with persistent anaemia after chemotherapy Netherlands journal of medicine 2011;69 (10):469-473 [PubMed]
  • Jansen Rogier R., Schinkel Janke, Koekkoek Sylvie, Pajkrt Dasja, Beld Marcel, de Jong Menno D., Molenkamp Richard Development and evaluation of a four-tube real time multiplex PCR assay covering fourteen respiratory viruses, and comparison to its corresponding single target counterparts Journal of clinical virology 2011;51 (3):179-185 [PubMed]
  • van den Berg Charlotte H. B. S., Grady Bart P. X., Schinkel Janke, van de Laar Thijs, Molenkamp Richard, van Houdt Robin, Coutinho Roel A., van Baarle Debbie, Prins Maria Female sex and IL28B, a synergism for spontaneous viral clearance in hepatitis C virus (HCV) seroconverters from a community-based cohort PLoS ONE 2011;6 (11):e27555 [PubMed]
  • Jansen Rogier R., Wieringa Joanne, Koekkoek Sylvie M., Visser Caroline E., Pajkrt Dasja, Molenkamp Richard, de Jong Menno D., Schinkel Janke Frequent detection of respiratory viruses without symptoms: toward defining clinically relevant cutoff values Journal of clinical microbiology 2011;49 (7):2631-2636 [PubMed]
  • Lindenburg Catharina E. A., Lambers Femke A. E., Urbanus Anouk T., Schinkel Janke, Jansen Peter L. M., Krol Anneke, Casteelen Gerty, van Santen Gerrit, van den Berg Charlotte H. S. B., Coutinho Roel A., Prins Maria, Weegink Christine J. Hepatitis C testing and treatment among active drug users in Amsterdam: results from the DUTCH-C project European journal of gastroenterology & hepatology 2011;23 (1):23-31 [PubMed]
  • Lange Christian M., Susser Simone, Herrmann Eva, Karey Ursula, Kieffer Tara L., Kwong Ann D., Schinkel Janke, Reesink Henk W., Zeuzem Stefan, Sarrazin Christoph HVR-1 heterogeneity during treatment with telaprevir with or without pegylated interferon alfa-2a Scandinavian journal of gastroenterology 2011;46 (11):1362-1368 [PubMed]
  • Grady Bart, van den Berg Charlotte, van der Helm Jannie, Schinkel Janke, Coutinho Roel, Krol Anneke, Prins Maria No impact of hepatitis C virus infection on mortality among drug users during the first decade after seroconversion Clinical gastroenterology and hepatology 2011;9 (9):786-792.e1 [PubMed]
  • Turchiarelli V., Schinkel J., Molenkamp R., Foschino Barbaro M. P., Carpagnano G. E., Spanevello A., Lutter R., Bel E. H., Sterk P. J. Repeated virus identification in the airways of patients with mild and severe asthma during prospective follow-up Allergy 2011;66 (8):1099-1106 [PubMed]
  • Lambers Femke A. E., Brinkman Kees, Schinkel Janke, Spijkerman Ingrid J. B., Molenkamp Richard, Coutinho Roel A., Prins Maria, van der Meer Jan T. M., Reesink H., van Baarle D., Smit C. Treatment of acute hepatitis C virus infection in HIV-infected MSM: the effect of treatment duration AIDS (London, England) 2011;25 (10):1333-1336 [PubMed]

2010

  • de Bruijne Joep, Bergmann Jilling F., Reesink Henk W., Weegink Christine J., Molenkamp Richard, Schinkel Janke, Tong Xiao, Li Jing, Treitel Michelle A., Hughes Eric A., van Lier Jan Jaap, van Vliet Andre A., Janssen Harry L. A., de Knegt Robert J. Antiviral activity of narlaprevir combined with ritonavir and pegylated interferon in chronic hepatitis C patients Hepatology (Baltimore, Md.) 2010;52 (5):1590-1599 [PubMed]
  • Jansen Rogier R., Schinkel Janke, dek Irene, Koekkoek Sylvie M., Visser Caroline E., de Jong Menno D., Molenkamp Richard, Pajkrt Dasja Quantitation of respiratory viruses in relation to clinical course in children with acute respiratory tract infections Pediatric infectious disease journal 2010;29 (1):82-84 [PubMed]
  • de Bruijne Joep, Bergmann Jilling F., Weegink Christine J., van Nieuwkerk Carin M. J., de Knegt Robert J., Komoda Yasumasa, van de Wetering de Rooij Jeroen J., van Vliet Andre, Jansen Peter L. M., Molenkamp Richard, Schinkel Janke, Reesink Hendrik, Janssen Harry L. A. Safety and antiviral activity of JTK-652: a novel HCV infection inhibitor Antiviral therapy 2010;15 (5):765-773 [PubMed]

2009

  • de Bruijne Joep, Schinkel Janke, Prins Maria, Koekkoek Sylvie M., Aronson Sem J., van Ballegooijen Marijn W., Reesink Hendrik W., Molenkamp Richard, van de Laar Thijs J. W. Emergence of hepatitis C virus genotype 4: phylogenetic analysis reveals three distinct epidemiological profiles Journal of clinical microbiology 2009;47 (12):3832-3838 [PubMed]
  • van de Laar Thijs J. W., Molenkamp Richard, van den Berg Charlotte, Schinkel Janke, Beld Marcel G. H. M., Prins Maria, Coutinho Roel A., Bruisten Sylvia M. Frequent HCV reinfection and superinfection in a cohort of injecting drug users in Amsterdam Journal of hepatology 2009;51 (4):667-674 [PubMed]
  • Urbanus Anouk T., van de Laar Thijs J., Stolte Ineke G., Schinkel Janke, Heijman Titia, Coutinho Roel A., Prins Maria Hepatitis C virus infections among HIV-infected men who have sex with men: an expanding epidemic AIDS (London, England) 2009;23 (12):F1-F7 [PubMed]
  • Molenkamp Richard, Harbers Gonneke, Schinkel Janke, Melchers Willem J. G. Identification of two Hepatitis C Virus isolates that failed genotyping by Versant LiPA 2.0 assay Journal of clinical virology 2009;44 (3):250-253 [PubMed]
  • Zaaijer H. L., Takkenberg R. B., Weegink C. J., Rebers S. P. H., Menting S., Reesink H. W., Schinkel J., Molenkamp R. Susceptibility of hepatitis B virus to lamivudine restored by resistance to adefovir Journal of medical virology 2009;81 (3):413-416 [PubMed]

2008

  • Wolthers Katja C., Benschop Kimberley S. M., Schinkel Janke, Molenkamp Richard, Bergevoet Rosemarijn M., Spijkerman Ingrid J. B., Kraakman H. Carlijn, Pajkrt Dasja Human parechoviruses as an important viral cause of sepsislike illness and meningitis in young children Clinical infectious diseases 2008;47 (3):358-363 [PubMed]

2007

  • Molenkamp Richard, van der Ham Alwin, Schinkel Janke, Beld Marcel Simultaneous detection of five different DNA targets by real-time Taqman PCR using the Roche LightCycler480: Application in viral molecular diagnostics Journal of virological methods 2007;141 (2):205-211 [PubMed]
  • Fanoy E. B., van Doorn H. R., Benschop Kimberley S. M., Schinkel J., Beld M., Pajkrt D., Hagenbeuk E. E. Verworven parese van de arm bij een zuigeling met enterovirusinfectie: mogelijk polio? Tijdschrift voor infectieziekten 2007;3:104-109

2006

  • Benschop Kimberley S. M., Schinkel Janke, Luken Manon E., van den Broek Peter J. M., Beersma Matthias F. C., Menelik Negassi, van Eijk Hetty W. M., Zaaijer Hans L., Vandenbroucke-Grauls Christina M. J. E., Beld Marcel G. H. M., Wolthers Katja C. Fourth human parechovirus serotype Emerging infectious diseases 2006;12 (10):1572-1575 [PubMed]
  • Benschop K. S. M., Schinkel J., Minnaar R. P., Pajkrt D., Spanjerberg L., Kraakman H. C., Berkhout B., Zaaijer H. L., Beld M. G. H. M., Wolthers K. C. Human parechovirus infections in Dutch children and the association between serotype and disease severity Clinical infectious diseases 2006;42 (2):204-210 [PubMed]
  • Schade Rogier P., Schinkel Janke, Roelandse Freek W. C., Geskus Ronald B., Visser Leo G., van Dijk J. Marc C., van Dijk Marc C., Voormolen Joan H. C., van Pelt Hans, Kuijper Ed J. Lack of value of routine analysis of cerebrospinal fluid for prediction and diagnosis of external drainage-related bacterial meningitis Journal of neurosurgery 2006;104 (1):101-108 [PubMed]

2005

  • van Tol M. J. D., Kroes A. C. M., Schinkel J., Dinkelaar W., Claas E. C. J., Jol-van der Zijde C. M., Vossen J. M. Adenovirus infection in paediatric stem cell transplant recipients: increased risk in young children with a delayed immune recovery Bone marrow transplantation 2005;36 (1):39-50 [PubMed]
  • Schade Rogier P., Schinkel Janke, Visser Leo G., van Dijk J. Marc C., Voormolen Joan H. C., Kuijper Ed J. Bacterial meningitis caused by the use of ventricular or lumbar cerebrospinal fluid catheters Journal of neurosurgery 2005;102 (2):229-234 [PubMed]

2004

  • Schinkel Janke, Spaan Willy J. M., Kroes Aloys C. M. Meta-analysis of mutations in the NS5A gene and hepatitis C virus resistance to interferon therapy: uniting discordant conclusions Antiviral therapy 2004;9 (2):275-286 [PubMed]
  • Verweij Jaco J., Blangé Roy A., Templeton Kate, Schinkel Janke, Brienen Eric A. T., van Rooyen Marianne A. A., van Lieshout Lisette, Polderman Anton M. Simultaneous detection of Entamoeba histolytica, Giardia lamblia, and Cryptosporidium parvum in fecal samples by using multiplex real-time PCR Journal of clinical microbiology 2004;42 (3):1220-1223 [PubMed]
  • Kalpoe Jayant S., Kroes Aloys C. M., de Jong Menno D., Schinkel Janke, de Brouwer Caroline S., Beersma Matthias F. C., Claas Eric C. J. Validation of clinical application of cytomegalovirus plasma DNA load measurement and definition of treatment criteria by analysis of correlation to antigen detection Journal of clinical microbiology 2004;42 (4):1498-1504 [PubMed]
  • Kalpoe J. S., Kroes A. C. M., de Jong M. D., Schinkel J., de Brouwer C. S., Beersma M. F. C., Claas E. C. J. Validation of clinical application of cytomegalovirus plasma DNA load measurement and definition of treatment criteria by analysis of correlation to antigen detection (vol 42, pg 1498, 2004) Journal of clinical microbiology 2004;42 (10):4917

2003

  • Verweij Jaco J., Schinkel Janke, Laeijendecker Daphne, van Rooyen Marianne A. A., van Lieshout Lisette, Polderman Anton M. Real-time PCR for the detection of Giardia lamblia Molecular and cellular probes 2003;17 (5):223-225 [PubMed]
  • Schinkel Janke, de Jong Menno D., Bruning Bas, van Hoek Bart, Spaan Willy J. M., Kroes Aloys C. M. The potentiating effect of ribavirin on interferon in the treatment of hepatitis C: lack of evidence for ribavirin-induced viral mutagenesis Antiviral therapy 2003;8 (6):535-540 [PubMed]

2001

  • Schinkel J., Kroes A. C., Wagtmans M. J., Lamers C. B., van Hoek B. Monitoring response during a randomised controlled trial of escalating interferon dose for chronic hepatitis C infection: predictive value of quantitative and qualitative HCV RNA assays Journal of clinical virology 2001;22 (1):61-71 [PubMed]

1999

  • van der Werf M. J., Schinkel J., van Santen G., Vergouwe I., Wix R. A., van Ameijden E. J. Highly active antiretroviral therapy among drug users in Amsterdam: self-perceived reasons for not receiving therapy AIDS (London, England) 1999;13 (10):1280-1281 [PubMed]
  • Schinkel J., Langendam M. W., Coutinho R. A., Krol A., Brouwer M., Schuitemaker H. No evidence for an effect of the CCR5 delta32/+ and CCR2b 64I/+ mutations on human immunodeficiency virus (HIV)-1 disease progression among HIV-1-infected injecting drug users Journal of infectious diseases 1999;179 (4):825-831 [PubMed]

1998

  • Schinkel J., Coutinho R. A., van Ameijden E. J. Protease inhibitors in HIV-infected injecting drug users in Amsterdam: cumulative incidence, determinants and impact AIDS (London, England) 1998;12 (10):1247-1249 [PubMed]
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