Prof. C.J.M. de Vries PhD publications

2021

• Medzikovic Lejla, Heese Hylja, van Loenen Pieter B., van Roomen Cindy P. A. A., Hooijkaas Ingeborg B., Christoffels Vincent M., Creemers Esther E., de Vries Carlie J. M., de Waard Vivian Nuclear receptor nur77 controls cardiac fibrosis through distinct actions on fibroblasts and cardiomyocytes International journal of molecular sciences 2021;22 (4):1-16 [PubMed]

2020

• Malinova Tsveta Broken symmetry and novel molecular players in endothelial adherens junctions 2020. 195p. ISBN 9789463807470. [UvA Dissertations Online] University of Amsterdam. (Supervisor: de Vries Carlie J. M.; Co-supervisors: Huveneers Stephan, Kluza Ewelina)
• van der Stoel Miesje, Schimmel Lilian, Nawaz Kalim, van Stalborch Anne-Marieke, de Haan Annett, Klaus-Bergmann Alexandra, Valent Erik T., Koenis Duco S., van Nieuw Amerongen Geerten P., de Vries Carlie J., de Waard Vivian, Gloerich Martijn, van Buul Jaap D., Huveneers Stephan DLC1 is a direct target of activated YAP/TAZ that drives collective migration and sprouting angiogenesis Journal of cell science 2020;133 (3) [PubMed]
• van Loon Nienke M. IDOL & MARCH6: E3 ligases in search for physiological meaning 2020. 218p. ISBN 9789463809290. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Zelcer Noam; Co-supervisor: de Vries Carlie J. M.)
• Kroone Chantal, Vos Mariska, Rademakers Timo, Kuijpers Marijke, Hoogenboezem Mark, van Buul Jaap, Heemskerk Johan W. M., Ruf Wolfram, van Hylckama Vlieg Astrid, Versteeg Henri H., Goumans Marie-José, de Vries Carlie J. M., Kurakula Kondababu LIM-only protein FHL2 attenuates vascular tissue factor activity, inhibits thrombus formation in mice and FHL2 genetic variation associates with human venous thrombosis Haematologica 2020;105 (6):1677-1685 [PubMed]
• Lith Sanne C., van Os Bram W., Seijkens Tom T. P., de Vries Carlie J. M. ‘Nur'turing tumor T cell tolerance and exhaustion: novel function for Nuclear Receptor Nur77 in immunity European journal of immunology 2020;50 (11):1643-1652 [PubMed]
• Marinković Goran, Koenis Duco Steven, de Camp Lisa, Jablonowski Robert, Graber Naomi, de Waard Vivian, de Vries Carlie Jacoba, Goncalves Isabel, Nilsson Jan, Jovinge Stefan, Schiopu Alexandru S100A9 Links Inflammation and Repair in Myocardial Infarction Circulation research 2020;127 (5):664-676 [PubMed]

2019

• Cook Emma C. L. Fine-tuning protein recycling to control cholesterol homeostasis 2019. 208p. ISBN 9789461829566. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Zelcer N. , de Vries C. J. M.; Co-supervisor: Loregger A.)
• Yin 殷晓科 Xiaoke, Wanga Shaynah, Fellows Adam L., Barallobre-Barreiro Javier, Lu Ruifang, Davaapil Hongorzul, Franken Romy, Fava Marika, Baig Ferheen, Skroblin Philipp, Xing Qiuru, Koolbergen David R., Groenink Maarten, Zwinderman Aeilko H., Balm Ron, de Vries Carlie J. M., Mulder Barbara J. M., Viner Rosa, Jahangiri Marjan, Reinhardt Dieter P., Sinha Sanjay, de Waard Vivian, Mayr Manuel Glycoproteomic Analysis of the Aortic Extracellular Matrix in Marfan Patients Arteriosclerosis, thrombosis, and vascular biology 2019;39 (9):1859-1873 [PubMed]
• van de Pol V., Vos M., DeRuiter M. C., Goumans M. J., de Vries C. J. M., Kurakula K. LIM-only protein FHL2 attenuates inflammation in vascular smooth muscle cells through inhibition of the NFκB pathway Vascular pharmacology 2019 [PubMed]
• Medzikovic Lejla, de Vries Carlie J. M., de Waard Vivian NR4A nuclear receptors in cardiac remodeling and neurohormonal regulation Trends in cardiovascular medicine 2019;29 (8):429-437 [PubMed]
• Kurakula Kondababu, Sun Xiao-Qing, Happé Chris, da Silva Goncalves Bos Denielli, Szulcek Robert, Schalij Ingrid, Wiesmeijer Karien C., Lodder Kirsten, Tu Ly, Guignabert Christophe, de Vries Carlie J. M., de Man Frances S., Vonk Noordegraaf Anton, ten Dijke Peter, Goumans Marie-José, Bogaard Harm Jan Prevention of progression of pulmonary hypertension by the Nur77 agonist 6-mercaptopurine: role of BMP signalling European respiratory journal 2019;54 (3) [PubMed]
• Hibender Stijntje, Wanga Shaynah, van der Made Ingeborg, Vos Mariska, Mulder Barbara J. M., Balm Ron, de Vries Carlie J. M., de Waard Vivian Renal cystic disease in the Fbn1C1039G/+ Marfan mouse is associated with enhanced aortic aneurysm formation Cardiovascular pathology 2019;38:1-6 [PubMed]

2018

• Medzikovic Lejla Nuclear receptor Nur77 at the heart of cardiac disease modulation 2018. ISBN 9789463750417. [UvA Dissertations Online] University of Amsterdam. (Supervisors: de Vries C. J. M., de Winter R. J.; Co-supervisors: de Waard V., Arkenbout E. K.)
• Tel-Karthaus Nina, Kers-Rebel Esther D., Looman Maaike W., Ichinose Hiroshi, de Vries Carlie J., Ansems Marleen Nuclear receptor Nur77 deficiency alters dendritic cell function Frontiers in immunology 2018;9 (AUG) [PubMed]
• Koenis Duco Steven, Medzikovic Lejla, van Loenen Pieter Bas, van Weeghel Michel, Huveneers Stephan, Vos Mariska, Evers-van Gogh Ingrid Johanna, van den Bossche Jan, Speijer Dave, Kim Yongsoo, Wessels Lodewyk, Zelcer Noam, Zwart Wilbert, Kalkhoven Eric, de Vries Carlie Jacoba Nuclear Receptor Nur77 Limits the Macrophage Inflammatory Response through Transcriptional Reprogramming of Mitochondrial Metabolism Cell reports 2018;24 (8):2127-2140.e7 [PubMed]
• Koenis Duco S. Nuclear receptors and their co-factors in hematological and inflammation-driven disorders 2018. ISBN 9789463750202. [UvA Dissertations Online] University of Amsterdam. (Supervisors: de Vries C. J. M., Zelcer N.; Co-supervisors: de Waard V., Huveneers S.)
• Medzikovic Lejla, van Roomen Cindy, Baartscheer Antonius, van Loenen Pieter B, de Vos Judith, Bakker Erik N T P, Koenis Duco S, Damanafshan Amin, Creemers Esther E, Arkenbout E Karin, de Vries Carlie J M, de Waard Vivian Nur77 protects against adverse cardiac remodelling by limiting neuropeptide Y signalling in the sympathoadrenal-cardiac axis Cardiovascular research 2018;114 (12):1617-1628 [PubMed]
• Koenis Duco S., Medzikovic Lejla, Vos Mariska, Beldman Thijs J., van Loenen Pieter B., van Tiel Claudia M., Hamers Anouk A. J., Rubio Iker Otermin, de Waard Vivian, de Vries Carlie J. M. Nur77 variants solely comprising the amino-terminal domain activate hypoxia-inducible factor-1 α and affect bone marrow homeostasis in mice and humans Journal of biological chemistry 2018;293 (39):15070-15083 [PubMed]
• Kurakula Kondababu, Koenis Duco S., Herzik Mark A., Liu Yanyun, Craft John W., van Loenen Pieter B., Vos Mariska, Tran M. Khang, Versteeg Henri H., Goumans Marie-José T. H., Ruf Wolfram, de Vries Carlie J. M., Şen Mehmet Structural and cellular mechanisms of peptidyl-prolyl isomerase Pin1-mediated enhancement of tissue factor gene expression, protein half-life, and pro-coagulant activity Haematologica 2018;103 (6):1073-1082 [PubMed]
• Jeanneteau Freddy, Barrère Christian, Vos Mariska, de Vries Carlie J. M., Rouillard Claude, Levesque Daniel, Dromard Yann, Moisan Marie-Pierre, Duric Vanja, Franklin Tina C., Duman Ronald S., Lewis David A., Ginsberg Stephen D., Arango-Lievano Margarita The Stress-Induced Transcription Factor NR4A1 Adjusts Mitochondrial Function and Synapse Number in Prefrontal Cortex Journal of neuroscience 2018;38 (6):1335-1350 [PubMed]

2017

• Wanga Shaynah, Hibender Stijntje, Ridwan Yanto, van Roomen Cindy, Vos Mariska, van der Made Ingeborg, van Vliet Nicole, Franken Romy, van Riel Luigi Amjg, Groenink Maarten, Zwinderman Aeilko H., Mulder Barbara Jm, de Vries Carlie Jm, Essers Jeroen, de Waard Vivian Aortic microcalcification is associated with elastin fragmentation in Marfan syndrome Journal of pathology 2017;243 (3):294-306 [PubMed]
• Pols Thijs W. H., Puchner Teresa, Korkmaz H. Inci, Vos Mariska, Soeters Maarten R., de Vries Carlie J. M. Lithocholic acid controls adaptive immune responses by inhibition of Th1 activation through the Vitamin D receptor PLoS ONE 2017;12 (5) [PubMed]

2016

• Reekers J. A., de Vries C. J. M. A Decade of Drug-Eluting Technology in Peripheral Arterial Disease: Blurred by Dissembling Evidence Cardiovascular and interventional radiology 2016;39 (12):1678-1680 [PubMed]
• Hibender Stijntje Exploring novel treatments to prevent aortic aneurysm growth in Marfan syndrome 2016. 169p. ISBN 9789461699640. [UvA Dissertations Online] University of Amsterdam. (Supervisors: de Vries C. J. M., Mulder B. J. M.; Co-supervisor: de Waard V.)
• Ruiter Matthijs S., Doornbos Albert, de Waard Vivian, de Winter Robbert J., Attevelt Nico J. M., Steendam Rob, de Vries Carlie J. M. Long-term effect of stents eluting 6-mercaptopurine in porcine coronary arteries Journal of negative results in biomedicine 2016;15 (1):20 [PubMed]
• Hamers Anouk A. J., Argmann Carmen, Moerland Perry D., Koenis Duco S., Marinković Goran, Sokolović Milka, de Vos Alex F., de Vries Carlie J. M., van Tiel Claudia M. Nur77-deficiency in bone marrow-derived macrophages modulates inflammatory responses, extracellular matrix homeostasis, phagocytosis and tolerance BMC genomics 2016;17 (1):162 [PubMed]
• Tran M. Khang, Kurakula Kondababu, Koenis Duco S., de Vries Carlie J. M. Protein-protein interactions of the LIM-only protein FHL2 and functional implication of the interactions relevant in cardiovascular disease BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2016;1863 (2):219-228 [PubMed]
• Hibender Stijntje, Franken Romy, van Roomen Cindy, ter Braake Anique, van der Made Ingeborg, Schermer Edith E., Gunst Quinn, van den Hoff Maurice J., Lutgens Esther, Pinto Yigal M., Groenink Maarten, Zwinderman Aeilko H., Mulder Barbara J. M., de Vries Carlie J. M., de Waard Vivian Resveratrol Inhibits Aortic Root Dilatation in the Fbn1C1039G/+ Marfan Mouse Model Arteriosclerosis, thrombosis, and vascular biology 2016;36 (8):1618-1626 [PubMed]
• Nelson Jessica K. Scratching the surface: Regulation of cell surface receptors in cholesterol metabolism 2016. 239p. ISBN 9789461699435. [UvA Dissertations Online] University of Amsterdam. (Supervisors: de Vries C. J. M., Zelcer N.)
• Huan Z., Yu H., Li H., Ruiter M. S., Chang J., Apachitei I., Duszczyk J., de Vries C. J. M., Fratila-Apachitei L. E. The effects of plasma electrolytically oxidized NiTi on in vitro endothelialization Colloids and surfaces. B, Biointerfaces 2016;141:365-373 [PubMed]

2015

• Kurakula Kondababu, Hamers Anouk A., van Loenen Pieter, de Vries Carlie J. M. 6-Mercaptopurine reduces cytokine and Muc5ac expression involving inhibition of NFκB activation in airway epithelial cells Respiratory research 2015;16 (1):73 [PubMed]
• Kurakula K., Vos M., Logiantara A., Roelofs J. J. T. H., Nieuwenhuis M. A., Koppelman G. H., Postma D. S., Brandsma C. A., Sin D. D., Bossé Y., Nickle D. C., van Rijt L. S., de Vries C. J. M. Deficiency of FHL2 attenuates airway inflammation in mice and genetic variation associates with human bronchial hyper-responsiveness Allergy 2015;70 (12):1531-1544 [PubMed]
• Hamers Anouk A. J., van Dam Laura, Teixeira Duarte José M., Vos Mariska, Marinković Goran, van Tiel Claudia M., Meijer Sybren L., van Stalborch Anne-Marieke, Huveneers Stephan, te Velde Anje A., de Jonge Wouter J., de Vries Carlie J. M. Deficiency of Nuclear Receptor Nur77 Aggravates Mouse Experimental Colitis by Increased NFκB Activity in Macrophages PLoS ONE 2015;10 (8):e0133598 [PubMed]
• Strang Aart C., Knetsch Menno L. W., Koole Leo H., de Winter Robbert J., van der Wal Allard C., de Vries Carlie J. M., Tak Paul P., Bisoendial Radjesh J., Stroes Erik S. G., Rotmans Joris I. Effect of anti-ApoA-I antibody-coating of stents on neointima formation in a rabbit balloon-injury model PLoS ONE 2015;10 (3):e0122836 [PubMed]
• Kurakula Kondababu, Sommer Daniela, Sokolovic Milka, Moerland Perry D., Scheij Saskia, van Loenen Pieter B., Koenis Duco S., Zelcer Noam, van Tiel Claudia M., de Vries Carlie J. M. LIM-Only Protein FHL2 Is a Positive Regulator of Liver X Receptors in Smooth Muscle Cells Involved in Lipid Homeostasis Molecular and cellular biology 2015;35 (1):52-62 [PubMed]
• Kurakula Kondababu, Vos Mariska, van Eijk Marco, Smits Hermelijn H., de Vries Carlie J. M. LIM-only protein FHL2 regulates experimental pulmonary Schistosoma mansoni egg granuloma formation European journal of immunology 2015;45 (11):3098-3106 [PubMed]
• Morias Yannick, Abels Chloé, Laoui Damya, van Overmeire Eva, Guilliams Martin, Schouppe Elio, Tacke Frank, deVries Carlie J., de Baetselier Patrick, Beschin Alain Ly6C- Monocytes Regulate Parasite-Induced Liver Inflammation by Inducing the Differentiation of Pathogenic Ly6C+ Monocytes into Macrophages PLoS pathogens 2015;11 (5):e1004873 [PubMed]
• Kurakula Kondababu, Vos Mariska, Logiantara Adrian, Roelofs Joris J., Nieuwenhuis Maartje A., Koppelman Gerard H., Postma Dirkje S., van Rijt Leonie S., de Vries Carlie J. M. Nuclear Receptor Nur77 Attenuates Airway Inflammation in Mice by Suppressing NF-κB Activity in Lung Epithelial Cells Journal of immunology (Baltimore, Md. 2015;195 (4):1388-1398 [PubMed]
• Kurakula Konda Babu Nur77 and FHL2: Novel players in vascular and immune disease 2015. 313p. ISBN 9789462330122. [UvA Dissertations Online] University of Amsterdam. (Supervisor: de Vries C. J. M.; Co-supervisors: van Tiel C. M., de Waard V.)
• Medzikovic Lejla, Schumacher Cees A., Verkerk Arie O., van Deel Elza D., Wolswinkel Rianne, van der Made Ingeborg, Bleeker Natascha, Cakici Daniella, van den Hoogenhof Maarten M. G., Meggouh Farid, Creemers Esther E., Remme Carol Ann, Baartscheer Antonius, de Winter Robbert J., de Vries Carlie J. M., Arkenbout E. Karin, de Waard Vivian Orphan nuclear receptor Nur77 affects cardiomyocyte calcium homeostasis and adverse cardiac remodelling Scientific reports 2015;5:15404 [PubMed]
• Hamers Anouk Anna Johanna Role of nuclear receptor Nur77 during inflammation 2015. 203p. ISBN 9789461089106. [UvA Dissertations Online] University of Amsterdam. (Supervisor: de Vries C. J. M.; Co-supervisor: de Waard V.)
• Ruiter Matthijs S., van Tiel Claudia M., Doornbos Albert, Marinković Goran, Strang Aart C., Attevelt Nico J. M., de Waard Vivian, de Winter Robbert J., Steendam Rob, de Vries Carlie J. M. Stents Eluting 6-Mercaptopurine Reduce Neointima Formation and Inflammation while Enhancing Strut Coverage in Rabbits PLoS ONE 2015;10 (9):e0138459 [PubMed]
• Marinković Goran Thiopurines and inhibition of Rac1 in vascular disease 2015. 169p. ISBN 9788687471320. [UvA Dissertations Online] University of Amsterdam. (Supervisor: de Vries C. J. M.; Co-supervisors: de Waard V., van Buul J. D.)

2014

• Marinković Goran, Hamers Anouk A. J., de Vries Carlie J. M., de Waard Vivian 6-Mercaptopurine reduces macrophage activation and gut epithelium proliferation through inhibition of GTPase Rac1 Inflammatory bowel diseases 2014;20 (9):1487-1495 [PubMed]
• Schaefer Antje, te Riet Joost, Ritz Katja, Hoogenboezem Mark, Anthony Eloise C., Mul Frederik P. J., de Vries Carlie J., Daemen Mat J., Figdor Carl G., van Buul Jaap D., Hordijk Peter L. Actin-binding proteins differentially regulate endothelial cell stiffness, ICAM-1 function and neutrophil transmigration Journal of cell science 2014;127 (Part 20):4470-4482 [PubMed]
• Rensing Katrijn L., de Jager Saskia C. A., Stroes Erik S., Vos Mariska, Twickler Marcel Th B., Dallinga-Thie Geesje M., de Vries Carlie J. M., Kuiper Johan, Bot Ilze, von der Thüsen Jan H. Akt2/LDLr double knockout mice display impaired glucose tolerance and develop more complex atherosclerotic plaques than LDLr knockout mice Cardiovascular research 2014;101 (2):277-287 [PubMed]
• Silvestre-Roig Carlos, Fernández Patricia, Mansego María L., van Tiel Claudia M., Viana Rosa, Anselmi Chiara Viviani, Condorelli Gianluigi, de Winter Robbert J., Martín-Fuentes Paula, Solanas-Barca María, Civeira Fernando, Focaccio Amelia, de Vries Carlie J. M., Chaves Felipe Javier, Andrés Vicente Genetic variants in CCNB1 associated with differential gene transcription and risk of coronary in-stent restenosis Circulation. Cardiovascular genetics 2014;7 (1):59-70 [PubMed]
• Marinković Goran, Kroon Jeffrey, Hoogenboezem Mark, Hoeben Kees A., Ruiter Matthijs S., Kurakula Kondababu, Otermin Rubio Iker, Vos Mariska, de Vries Carlie J. M., van Buul Jaap D., de Waard Vivian Inhibition of GTPase Rac1 in endothelium by 6-mercaptopurine results in immunosuppression in nonimmune cells: new target for an old drug Journal of immunology (Baltimore, Md. 2014;192 (9):4370-4378 [PubMed]
• Hamers Anouk A. J., Uleman Sven, van Tiel Claudia M., Kruijswijk Daniëlle, van Stalborch Anne-Marieke, Huveneers Stephan, de Vries Carlie J. M., van 't Veer Cornelis Limited role of nuclear receptor Nur77 in Escherichia coli-induced peritonitis Infection and immunity 2014;82 (1):253-264 [PubMed]
• Franken Romy, Hibender Stijntje, den Hartog Alexander W., Radonic Teodora, de Vries Carlie J. M., Zwinderman Aeilko H., Groenink Maarten, Mulder Barbara J. M., de Waard Vivian No beneficial effect of general and specific anti-inflammatory therapies on aortic dilatation in Marfan mice PLoS ONE 2014;9 (9):e107221-(7 p.) [PubMed]
• Kurakula Kondababu, Koenis Duco S., van Tiel Claudia M., de Vries Carlie J. M. NR4A nuclear receptors are orphans but not lonesome BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2014;1843 (11):2543-2555 [PubMed]
• Zhou Fangfang, Drabsch Yvette, Dekker Tim J. A., de Vinuesa Amaya Garcia, Li Yihao, Hawinkels Lukas J. A. C., Sheppard Kelly-Ann, Goumans Marie-José, Luwor Rodney B., de Vries Carlie J., Mesker Wilma E., Tollenaar Rob A. E. M., Devilee Peter, Lu Chris X., Zhu Hongjian, Zhang Long, Dijke Peter Ten Nuclear receptor NR4A1 promotes breast cancer invasion and metastasis by activating TGF-β signalling Nature communications 2014;5:3388-(13 p.) [PubMed]
• Hoeksema Marten A., Gijbels Marion J. J., van den Bossche Jan, van der Velden Saskia, Sijm Ayestha, Neele Annette E., Seijkens Tom, Stöger J. Lauran, Meiler Svenja, Boshuizen Marieke C. S., Dallinga-Thie Geesje M., Levels Johannes H. M., Boon Louis, Mullican Shannon E., Spann Nathanael J., Cleutjens Jack P., Glass Chris K., Lazar Mitchell A., de Vries Carlie J. M., Biessen Erik A. L., Daemen Mat J. A. P., Lutgens Esther, de Winther Menno P. J. Targeting macrophage Histone deacetylase 3 stabilizes atherosclerotic lesions EMBO molecular medicine 2014;6 (9):1124-1132 [PubMed]
• Kurakula Kondababu, Vos Mariska, Otermin Rubio Iker, Marinković Goran, Buettner Reinhard, Heukamp Lukas C., Stap Jan, de Waard Vivian, van Tiel Claudia M., de Vries Carlie J. M. The LIM-only protein FHL2 reduces vascular lesion formation involving inhibition of proliferation and migration of smooth muscle cells PLoS ONE 2014;9 (4):e94931-(9 p.) [PubMed]

2013

• Marinkovic Goran, Hibender Stijntje, Hoogenboezem Mark, van Broekhoven Amber, Girigorie Arginell F., Bleeker Natascha, Hamers Anouk A. J., Stap Jan, van Buul Jaap D., de Vries Carlie J. M., de Waard Vivian Immunosuppressive drug azathioprine reduces aneurysm progression through inhibition of Rac1 and c-Jun-terminal-N-kinase in endothelial cells Arteriosclerosis, thrombosis, and vascular biology 2013;33 (10):2380-2388 [PubMed]
• Hamers Anouk A. J., Hanna Richard N., Nowyhed Heba, Hedrick Catherine C., de Vries Carlie J. M. NR4A nuclear receptors in immunity and atherosclerosis Current opinion in lipidology 2013;24 (5):381-385 [PubMed]
• Kurakula Kondababu, Hamers Anouk A. J., de Waard Vivian, de Vries Carlie J. M. Nuclear Receptors in atherosclerosis: a superfamily with many 'Goodfellas' Molecular and cellular endocrinology 2013;368 (1-2):71-84 [PubMed]

2012

• Hamers Anouk A. J., Vos Mariska, Rassam Fadi, Marincovic Goran, Kurakula Kondababu, van Gorp Patrick J., de Winther Menno P. J., Gijbels Marion J. J., de Waard Vivian, de Vries Carlie J. M. Bone Marrow-Specific Deficiency of Nuclear Receptor Nur77 Enhances Atherosclerosis Circulation research 2012;110 (3):428-U147 [PubMed]
• van Tiel Claudia M., Kurakula Kondababu, Koenis Duco S., van der Wal Erik, de Vries Carlie J. M. Dual function of Pin1 in NR4A nuclear receptor activation: Enhanced activity of NR4As and increased Nur77 protein stability BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2012;1823 (10):1894-1904 [PubMed]
• Klomp Margo Evaluation of a novel stent technology: the Genous EPC capturing stent 2012. 331p. ISBN 9789461911162. [UvA Dissertations Online] University of Amsterdam. (Supervisors: de Winter R. J., de Vries C. J. M.; Co-supervisor: Tijssen J. G. P.)
• de Waard Vivian, Gijbels Marion J. J., Lutgens Esther, de Winther Menno P. J., de Vries Carlie J. M. Models and Analysis of Atherosclerosis, Restenosis, and Aneurysm Formation in the Mouse Current protocols in mouse biology 2012;2 (4):317-345 [PubMed]
• van Tiel Claudia M., de Vries Carlie J. M. NR4All in the vessel wall Journal of steroid biochemistry and molecular biology 2012;130 (3-5):186-193 [PubMed]
• Maijenburg Marijke W., Gilissen Christian, Melief Sara M., Kleijer Marion, Weijer Kees, ten Brinke Anja, Roelofs Helene, van Tiel Claudia M., Veltman Joris A., de Vries Carlie J. M., van der Schoot C. Ellen, Voermans Carlijn Nuclear Receptors Nur77 and Nurr1 Modulate Mesenchymal Stromal Cell Migration Stem cells and development 2012;21 (2):228-238 [PubMed]

2011

• Groenendijk Bianca C. W., Benus Germaine F. J. D., Klous Anita, Pacheco Yolanda M., Volger Oscar L., Fledderus Joost O., Ferreira Valerie, Engelse Marten A., Pannekoek Hans, ten Dijke Peter, Horrevoets Anton J. G., de Vries Carlie J. M. Activin A induces a non-fibrotic phenotype in smooth muscle cells in contrast to TGF-β Experimental cell research 2011;317 (2):131-142 [PubMed]
• Kurakula Kondababu, van der Wal Erik, Geerts Dirk, van Tiel Claudia M., de Vries Carlie J. M. FHL2 protein is a novel co-repressor of nuclear receptor Nur77 Journal of biological chemistry 2011;286 (52):44336-44343 [PubMed]
• Matlung Hanke L. Inflammation and transglutaminases in vascular remodeling and artherosclerosis 2011. 170p. ISBN 9789053354070. [UvA Dissertations Online] University of Amsterdam. (Supervisors: van Bavel E. T., de Vries C. J. M.; Co-supervisor: Bakker E. N. T. P.)

2010

• Pols Thijs W. H., Bonta Peter I., Pires Nuno M. M., Otermin Iker, Vos Mariska, de Vries Margreet R., van Eijk Marco, Roelofsen Jeroen, Havekes Louis M., Quax Paul H. A., van Kuilenburg André B. P., de Waard Vivian, Pannekoek Hans, de Vries Carlie J. M. 6-Mercaptopurine Inhibits Atherosclerosis in Apolipoprotein E*3-Leiden Transgenic Mice Through Atheroprotective Actions on Monocytes and Macrophages Arteriosclerosis, thrombosis, and vascular biology 2010;30 (8):1591-1597 [PubMed]
• Schirmer Stephan H., Bot Pieter T., Fledderus Joost O., van der Laan Anja M., Volger Oscar L., Laufs Ulrich, Boehm Michael, de Vries Carlie J. M., Horrevoets Anton J. G., Piek Jan J., Hoefer Imo E., van Royen Niels Blocking Interferon beta Stimulates Vascular Smooth Muscle Cell Proliferation and Arteriogenesis Journal of biological chemistry 2010;285 (45):34677-34685 [PubMed]
• van Olffen Ronald W., de Bruin Alex M., Vos Mariska, Staniszewska Anna D., Hamann Jörg, van Lier René A. W., de Vries Carlie J. M., Nolte Martijn A. CD70-Driven Chronic Immune Activation Is Protective against Atherosclerosis Journal of innate immunity 2010;2 (4):344-352 [PubMed]
• Janmaat Maarten L., Heerkens Jasper L. T., de Bruin Alexander M., Klous Anita, de Waard Vivian, de Vries Carlie J. M. Erythropoietin accelerates smooth muscle cell-rich vascular lesion formation in mouse through endothelial cell activation involving enhanced PDGF-BB release Blood 2010;115 (7):1453-1460 [PubMed]
• Bonta Peter I., Matlung Hanke L., Vos Mariska, Peters Stephan L. M., Pannekoek Hans, Bakker Erik N. T. P., de Vries Carlie J. M. Nuclear Receptor Nur77 inhibits vascular outward remodeling and reduces macrophage accumulation and matrix metalloproteinase levels Cardiovascular research 2010;87 (3):561-568 [PubMed]
• Bonta Peter I., Pols Thijs W. H., van Tiel Claudia M., Vos Mariska, Arkenbout E. Karin, Rohlena Jakub, Koch Karel T., de Maat Moniek P. M., Tanck Michael W. T., de Winter Robbert J., Pannekoek Hans, Biessen Erik A. L., Bot Ilze, de Vries Carlie J. M. Nuclear Receptor Nurr1 Is Expressed In and Is Associated With Human Restenosis and Inhibits Vascular Lesion Formation In Mice Involving Inhibition of Smooth Muscle Cell Proliferation and Inflammation Circulation 2010;121 (18):2023-2032 [PubMed]
• Matlung Hanke L., VanBavel Ed, van den Akker Jeroen, de Vries Carlie J. M., Bakker Erik N. T. P. Role of transglutaminases in cuff-induced atherosclerotic lesion formation in femoral arteries of ApoE3 Leiden mice Atherosclerosis 2010;213 (1):77-84 [PubMed]

2009

• Kardys Isabella, van Tiel Claudia M., de Vries Carlie J. M., Pannekoek Hans, Uitterlinden André G., Hofman Albert, Witteman Jacqueline C. M., de Maat Moniek P. M. Haplotypes of the NR4A2/NURR1 Gene and Cardiovascular Disease. The Rotterdam Study Human mutation 2009;30 (3):417-423 [PubMed]
• Pols Thijs W. H. NR4A Nuclear receptors in atherosclerosis 2009. 149p. ISBN 9789090239828. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Pannekoek H., de Vries C. J. M.)
• Bonta Peter I. NR4A Nuclear receptors in vascular disease 2009. 207p. ISBN 9789490122652. [UvA Dissertations Online] University of Amsterdam. (Supervisors: Pannekoek H., de Vries C. J. M.)
• van Tiel Claudia M., Bonta Peter I., Rittersma Saskia Z. H., Beijk Marcel A. M., Bradley Edward J., Klous Anita M., Koch Karel T., Baas Frank, Jukema J. Wouter, Pons Douwe, Sampietro M. Lourdes, Pannekoek Hans, de Winter Robbert J., de Vries Carlie J. M. p27kip1-838C>A Single Nucleotide Polymorphism Is Associated With Restenosis Risk After Coronary Stenting and Modulates p27kip1 Promoter Activity Circulation 2009;120 (8):669-676 [PubMed]
• Roelofs Joris J. T. H., Teske Gwendoline J. D., Bonta Peter I., de Vries Carlie J. M., Meijers Joost C. M., Weening Jan J., van der Poll Tom, Florquin Sandrine Plasminogen activator inhibitor-1 regulates neutrophil influx during acute pyelonephritis Kidney international 2009;75 (1):52-59 [PubMed]

2008

• Pols Thijs W. H., de Vries Carlie J. M. A shining future for NR4A nuclear receptors in DNA repair Pigment cell & melanoma research 2008;21 (3):342-343 [PubMed]
• Bakker Erik N. T. P., Matlung Hanke L., Bonta Peter, de Vries Carlie J., van Rooijen Nico, VanBavel Ed Blood flow-dependent arterial remodelling is facilitated by inflammation but directed by vascular tone Cardiovascular research 2008;78 (2):341-348 [PubMed]
• Bonta Peter I., de Vries Carlie J. M. Hypoxia regulates resistin in vascular smooth muscle cells, what next? Journal of hypertension 2008;26 (12):2271-2273 [PubMed]
• van Tiel Claudia M., de Vries Carlie J. M. NR4A Nuclear Receptors in the Vessel Wallin: J. L. Junien, B. Staels, editors. Nuclear receptors as molecular targets for cardiometabolic and central nervous system diseases. Amsterdam: IOS Press; 2008. p. 75-83, ISBN 9781586038571
• Pols Thijs W. H., Ottenhoff Roelof, Vos Mariska, Levels Johannes H. M., Quax Paul H. A., Meijers Joost C. M., Pannekoek Hans, Groen Albert K., de Vries Carlie J. M. Nur77 modulates hepatic lipid metabolism through suppression of SREBP1c activity Biochemical and biophysical research communications 2008;366 (4):910-916 [PubMed]

2007

• Pires Nuno M. M., Pols Thijs W. H., de Vries Margreet R., van Tiel Claudia M., Bonta Peter I., Vos Mariska, Arkenbout E. Karin, Pannekoek Hans, Jukema J. Wouter, Quax Paul H. A., de Vries Carlie J. M. Activation of nuclear receptor Nur77 by 6-mercaptopurine protects against neointima formation Circulation 2007;115 (4):493-500 [PubMed]
• Pols Thijs W. H., Bonta Peter I., de Vries Carlie J. M. NR4A nuclear orphan receptors: protective in vascular disease? Current opinion in lipidology 2007;18 (5):515-520 [PubMed]
• Bonta Peter I., Pols Thijs W. H., de Vries Carlie J. M. NR4A nuclear receptors in atherosclerosis and vein-graft disease Trends in cardiovascular medicine 2007;17 (3):105-111 [PubMed]
• Renckens Rosemarijn, Roelofs Joris J. T. H., Bonta Peter I., Florquin Sandrine, de Vries Carlie J. M., Levi Marcel, Carmeliet Peter, van't Veer Cornelis, van der Poll Tom Plasminogen activator inhibitor type 1 is protective during severe Gram-negative pneumonia Blood 2007;109 (4):1593-1601 [PubMed]

2006

• Schepers A., Eefting D., Bonta P. I., Grimbergen J. M., de Vries M. R., van Weel V., de Vries C. J., Egashira K., van Bockel J. H., Quax P. H. A. Anti-MCP-1 gene therapy inhibits vascular smooth muscle cells proliferation and attenuates vein graft thickening both in vitro and in vivo Arteriosclerosis, thrombosis, and vascular biology 2006;26 (9):2063-2069 [PubMed]
• Bakker Erik N. T. P., Pistea Adrian, Spaan Jos A. E., Rolf Titia, de Vries Carlie J., van Rooijen Nico, Candi Eleonara, VanBavel Ed Flow-dependent remodeling of small arteries in mice deficient for tissue-type transglutaminase: possible compensation by macrophage-derived factor XIII Circulation research 2006;99 (1):86-92 [PubMed]
• Bonta Peter I., van Tiel Claudia M., Vos Mariska, Pols Thijs W. H., van Thienen Johannes V., Ferreira Valérie, Arkenbout E. Karin, Seppen Jurgen, Spek C. Arnold, van der Poll Tom, Pannekoek Hans, de Vries Carlie J. M. Nuclear receptors Nur77, Nurr1, and NOR-1 expressed in atherosclerotic lesion macrophages reduce lipid loading and inflammatory responses Arteriosclerosis, thrombosis, and vascular biology 2006;26 (10):2288-2294 [PubMed]
• de Waard Vivian, Arkenbout E. Karin, Vos Mariska, Mocking Astrid I. M., Niessen Hans W. M., Stooker Wim, de Mol Bas A. J. M., Quax Paul H. A., Bakker Erik N. T. P., VanBavel Ed, Pannekoek Hans, de Vries Carlie J. M. TR3 nuclear orphan receptor prevents cyclic stretch-induced proliferation of venous smooth muscle cells American journal of pathology 2006;168 (6):2027-2035 [PubMed]

2005

• Dekker Rob J., van Thienen Johannes V., Rohlena Jakub, de Jager Saskia C., Elderkamp Yvonne W., Seppen Jurgen, de Vries Carlie J. M., Biessen Erik A. L., van Berkel Theo J. C., Pannekoek Hans, Horrevoets Anton J. G. Endothelial KLF2 links local arterial shear stress levels to the expression of vascular tone-regulating genes American journal of pathology 2005;167 (2):609-618 [PubMed]

2004

• Bassett Mary H., Suzuki Takashi, Sasano Hironobu, de Vries Carlie J. M., Jimenez Patricia T., Carr Bruce R., Rainey William E. The orphan nuclear receptor NGFIB regulates transcription of 3beta-hydroxysteroid dehydrogenase. implications for the control of adrenal functional zonation Journal of biological chemistry 2004;279 (36):37622-37630 [PubMed]
• Arkenbout E. K. TR3 nuclear orphan receptor in cardiovascular disease 2004. 143p. ISBN 9789090183350. [UvA Dissertations Online] University of Amsterdam. (Supervisor: Pannekoek H.; Co-supervisor: de Vries C. J. M.)

2003

• Engelse Marten A., Arkenbout E. Karin, Pannekoek Hans, de Vries Carlie J. M. Activin and TR3 orphan receptor: Two 'atheroprotective' genes as evidenced in dedicated mouse models Clinical and experimental pharmacology & physiology 2003;30 (11):894-899 [PubMed]
• de Waard Vivian, van Achterberg Tanja A. E., Beauchamp Nicholas J., Pannekoek Hans, de Vries Carlie J. M. Cardiac ankyrin repeat protein (CARP) expression in human and murine atherosclerotic lesions - Activin induces carp in smooth muscle cells Arteriosclerosis, thrombosis, and vascular biology 2003;23 (1):64-68 [PubMed]
• Arkenbout E. Karin, Dekker Rob J., de Vries Carlie J. M., Horrevoets Anton J. G., Pannekoek Hans Focusing on transcription factor families in atherogenesis: the function of LKLF and TR3 Thrombosis and haemostasis 2003;89 (3):522-529 [PubMed]
• Beauchamp Nicholas J., van Achterberg Tanja A. E., Engelse Marten A., Pannekoek Hans, de Vries Carlie J. M. Gene expression profiling of resting and activated vascular smooth muscle cells by serial analysis of gene expression and clustering analysis Genomics 2003;82 (3):288-299 [PubMed]
• Arkenbout E. Karin, van Bragt Maaike, Eldering Eric, van Bree Chris, Grimbergen Jos M., Quax Paul H. A., Pannekoek Hans, de Vries Carlie J. M. TR3 orphan receptor is expressed in vascular endothelial cells and mediates cell cycle arrest Arteriosclerosis, thrombosis, and vascular biology 2003;23 (9):1535-1540 [PubMed]
• Bijnens Ann P. J. J., Gils Ann, Jutten Barry, Faber Birgit C. G., Heeneman Sylvia, Kitslaar Peter J. E. H. M., Tordoir Jan H. M., de Vries Carlie J. M., Kroon Abraham A., Daemen Mat J. A. P., Cleutjens Kitty B. J. M. Vasculin, a novel vascular protein differentially expressed in human atherogenesis Blood 2003;102 (8):2803-2810 [PubMed]

2002

• Engelse Marten A., Lardenoye JanWillem H. P., Neele Jolanda M., Grimbergen Jos M., de Vries Margreet R., Lamfers Martine L. M., Pannekoek Hans, Quax Paul H. A., de Vries Carlie J. M. Adenoviral activin A expression prevents intimal hyperplasia in human and murine blood vessels by maintaining the contractile smooth muscle cell phenotype Circulation research 2002;90 (10):1128-1134 [PubMed]
• Rensen S. S. M., Thijssen V. L. J. L., de Vries C. J., Doevendans P. A., Detera-Wadleigh S. D., van Eys G. J. J. M. Expression of the smoothelin gene is mediated by alternative promoters Cardiovascular research 2002;55 (4):850-863 [PubMed]
• Leeksma Onno C., van Achterberg Tanja A. E., Tsumura Yoshikazu, Toshima Jiro, Eldering Eric, Kroes Wilma G. M., Mellink Clemens, Spaargaren Marcel, Mizuno Kensaku, Pannekoek Hans, de Vries Carlie J. M. Human sprouty 4, a new ras antagonist on 5q31, interacts with the dual specificity kinase TESK1 European Journal of Biochemistry / FEBS 2002;269 (10):2546-2556 [PubMed]
• Arkenbout E. Karin, de Waard Vivian, van Bragt Maaike, van Achterberg Tanja A. E., Grimbergen Jos M., Pichon Bruno, Pannekoek Hans, de Vries Carlie J. M. Protective function of transcription factor TR3 orphan receptor in atherogenesis - Decreased lesion formation in carotid artery ligation model in TR3 transgenic mice Circulation 2002;106 (12):1530-1535 [PubMed]

2001

• Engelse M. A., Neele J. M., Bronckers A. L., Pannekoek H., de Vries C. J. Vascular calcification: expression patterns of the osteoblast-specific gene core binding factor alpha-1 and the protective factor matrix gla protein in human atherogenesis Cardiovascular research 2001;52 (2):281-289 [PubMed]

2000

• Wicks S. R., de Vries C. J., van Luenen H. G., Plasterk R. H. CHE-3, a cytosolic dynein heavy chain, is required for sensory cilia structure and function in Caenorhabditis elegans Developmental biology 2000;221 (2):295-307 [PubMed]
• de Vries C. J., van Achterberg T. A., Horrevoets A. J., ten Cate J. W., Pannekoek H. Differential display identification of 40 genes with altered expression in activated human smooth muscle cells. Local expression in atherosclerotic lesions of smags, smooth muscle activation-specific genes Journal of biological chemistry 2000;275 (31):23939-23947 [PubMed]
• Schubert C. M., Lin R., de Vries C. J., Plasterk R. H., Priess J. R. MEX-5 and MEX-6 function to establish soma/germline asymmetry in early C. elegans embryos Molecular cell 2000;5 (4):671-682 [PubMed]

1999

• Engelse M. A., Neele J. M., van Achterberg T. A., van Aken B. E., van Schaik R. H., Pannekoek H., de Vries C. J. Human activin-A is expressed in the atherosclerotic lesion and promotes the contractile phenotype of smooth muscle cells Circulation research 1999;85 (10):931-939 [PubMed]
• Boot R. G., van Achterberg T. A., van Aken B. E., Renkema G. H., Jacobs M. J., Aerts J. M., de Vries C. J. Strong induction of members of the chitinase family of proteins in atherosclerosis: chitotriosidase and human cartilage gp-39 expressed in lesion macrophages Arteriosclerosis, thrombosis, and vascular biology 1999;19 (3):687-694 [PubMed]
• Horrevoets A. J., Fontijn R. D., van Zonneveld A. J., de Vries C. J., ten Cate J. W., Pannekoek H. Vascular endothelial genes that are responsive to tumor necrosis factor-alpha in vitro are expressed in atherosclerotic lesions, including inhibitor of apoptosis protein-1, stannin, and two novel genes Blood 1999;93 (10):3418-3431 [PubMed]

1996

• de Vries C. J., de Boer J., Joore J., Strähle U., van Achterberg T. A., Huylebroeck D., Verschueren K., Miyazono K., van den Eijnden-van Raaij A. J., Zivkovic D. Active complex formation of type I and type II activin and TGF beta receptors in vivo as studied by overexpression in zebrafish embryos Mechanisms of development 1996;54 (2):225-236 [PubMed]
• de Winter J. P., ten Dijke P., de Vries C. J., van Achterberg T. A., Sugino H., de Waele P., Huylebroeck D., Verschueren K., van den Eijnden-van Raaij A. J. Follistatins neutralize activin bioactivity by inhibition of activin binding to its type II receptors Molecular and cellular endocrinology 1996;116 (1):105-114 [PubMed]
• de Winter J. P., de Vries C. J., van Achterberg T. A., Ameerun R. F., Feijen A., Sugino H., de Waele P., Huylebroeck D., Verschueren K., van den Eijden-van Raaij A. J. Truncated activin type II receptors inhibit bioactivity by the formation of heteromeric complexes with activin type I. receptors Experimental cell research 1996;224 (2):323-334 [PubMed]

1994

• Horrevoets A. J., Smilde A., de Vries C. [=Carlie J. M.], Pannekoek H. THE SPECIFIC ROLES OF FINGER AND KRINGLE-2 DOMAINS OF TISSUE-TYPE PLASMINOGEN-ACTIVATOR DURING IN-VITRO FIBRINOLYSIS Journal of biological chemistry 1994;269 (17):12639-12644 [PubMed]

1993

• Quinn T. P., Peters K. G., de Vries C. [=Carlie J. M.], Ferrara N., Williams L. T. Fetal liver kinase 1 is a receptor for vascular endothelial growth factor and is selectively expressed in vascular endothelium Proceedings of the National Academy of Sciences of the United States of America 1993;90 (16):7533-7537 [PubMed]
• Peters K. G., de Vries C. [=Carlie J. M.], Williams L. T. Vascular endothelial growth factor receptor expression during embryogenesis and tissue repair suggests a role in endothelial differentiation and blood vessel growth Proceedings of the National Academy of Sciences of the United States of America 1993;90 (19):8915-8919 [PubMed]

1992

• Werner S., Duan D. S., de Vries C. [=Carlie J. M.], Peters K. G., Johnson D. E., Williams L. T. Differential splicing in the extracellular region of fibroblast growth factor receptor 1 generates receptor variants with different ligand-binding specificities Molecular and cellular biology 1992;12 (1):82-88 [PubMed]
• de Vries C. [=Carlie J. M.], Escobedo J. A., Ueno H., Houck K., Ferrara N., Williams L. T. The fms-like tyrosine kinase, a receptor for vascular endothelial growth factor Science 1992;255 (5047):989-991 [PubMed]

1991

• Beckmann R., Geiger M., de Vries C. [=Carlie J. M.], Pannekoek H., Binder B. R. Fibronectin decreases the stimulatory effect of fibrin and fibrinogen fragment FCB-2 on plasmin formation by tissue plasminogen activator Journal of biological chemistry 1991;266 (4):2227-2232 [PubMed]
• de Vries C. [=Carlie J. M.], Veerman H., Nesheim M. E., Pannekoek H. Kinetic characterization of tissue-type plasminogen activator (t-PA) and t-PA deletion mutants Thrombosis and haemostasis 1991;65 (3):280-285 [PubMed]
• Kramer I. M., Koornneef I., de Vries C. [=Carlie J. M.], de Groot R. P., de Laat S. W., van den Eijnden-van Raaij A. J., Kruijer W. Phosphorylation of nuclear protein is an early event in TGF beta 1 action Biochemical and biophysical research communications 1991;175 (3):816-822 [PubMed]

1990

• de Vries C. [=Carlie J. M.], Veerman H., Koornneef E., Pannekoek H. Tissue-type plasminogen activator and its substrate Glu-plasminogen share common binding sites in limited plasmin-digested fibrin Journal of biological chemistry 1990;265 (23):13547-13552 [PubMed]

1989

• de Vries C. [=Carlie J. M.], Veerman H., Pannekoek H. Identification of the domains of tissue-type plasminogen activator involved in the augmented binding to fibrin after limited digestion with plasmin Journal of biological chemistry 1989;264 (21):12604-12610 [PubMed]
• Wagner O. F., de Vries C. [=Carlie J. M.], Hohmann C., Veerman H., Pannekoek H. Interaction between plasminogen activator inhibitor type 1 (PAI-1) bound to fibrin and either tissue-type plasminogen activator (t-PA) or urokinase-type plasminogen activator (u-PA). Binding of t-PA/PAI-1 complexes to fibrin mediated by both the finger and the kringle-2 domain of t-PA Journal of clinical investigation 1989;84 (2):647-655 [PubMed]

1988

• de Vries C. [=Carlie J. M.], Veerman H., Blasi F., Pannekoek H. Artificial exon shuffling between tissue-type plasminogen activator (t-PA) and urokinase (u-PA): a comparative study on the fibrinolytic properties of t-PA/u-PA hybrid proteins Biochemistry 1988;27 (7):2565-2572 [PubMed]

1986

• Quadt R., Verweij C. L., de Vries C. J., Briët E., Pannekoek H. A polymorphic Xba I site within the human von Willebrand factor (vWF) gene identified by a vWF cDNA clone Nucleic acids research 1986;14 (17):7139 [PubMed]

1985

• Verweij C. L., de Vries C. J., Distel B., van Zonneveld A. J., van Kessel A. G., van Mourik J. A., Pannekoek H. Construction of cDNA coding for human von Willebrand factor using antibody probes for colony-screening and mapping of the chromosomal gene Nucleic acids research 1985;13 (13):4699-4717 [PubMed]